RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 TSTD2Q5T7W7 516 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 PDPK2PQ6A1A2 396 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 ADAMTSL4Q6UY14 1074 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 KDM7AQ6ZMT4 941 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 PEX13Q92968 403 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 DNAJC1Q96KC8 554 aaKnown RBP14.84□□□□□ -0.03
SUMO1-203ENST00000392246 AGAP2Q99490 1192 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 TEX101Q9BY14 249 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 ZDHHC5Q9C0B5 715 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 MRM3Q9HC36 420 aaKnown RBP14.84□□□□□ -0.03
SUMO1-203ENST00000392246 PHPT1Q9NRX4 125 aaPredicted RBP14.84□□□□□ -0.03
SUMO1-203ENST00000392246 GPR27Q9NS67 375 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 SYBUQ9NX95 663 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 APPL1Q9UKG1 709 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 FNDC3AQ9Y2H6 1198 aaKnown RBP14.84□□□□□ -0.03
SUMO1-203ENST00000392246 OR1A2Q9Y585 309 aa14.84□□□□□ -0.03
SUMO1-203ENST00000392246 GLYATL1P3A0A0U1RQE8 302 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 MAGEB16A2A368 324 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 CACNB4O00305 520 aaPredicted RBP14.83□□□□□ -0.04
SUMO1-203ENST00000392246 ARHGAP33O14559 1287 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 TP73O15350 636 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 PSMA3P25788 255 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 HTR1BP28222 390 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 NXPH1P58417 271 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 TMPRSS15P98073 1019 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 CDK3Q00526 305 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 GRIK2Q13002 908 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 PDE1CQ14123 709 aaPredicted RBP14.83□□□□□ -0.04
SUMO1-203ENST00000392246 KIF19Q2TAC6 998 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 IL27RAQ6UWB1 636 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 FAM151BQ6UXP7 276 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 HEATR4Q86WZ0 1026 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 SLC22A18ASQ8N1D0 253 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 DCLK2Q8N568 766 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 FUBP1Q96AE4 644 aaKnown RBP14.83□□□□□ -0.04
SUMO1-203ENST00000392246 CDKN2AIPNLQ96HQ2 116 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 KIFC1Q9BW19 673 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 GDF3Q9NR23 364 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 CHRAC1Q9NRG0 131 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 SAMD15Q9P1V8 674 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 FKBPLQ9UIM3 349 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 SOX13Q9UN79 622 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 PCDH15Q96QU1 1955 aa14.83□□□□□ -0.04
SUMO1-203ENST00000392246 SPTY2D1-AS1A0A0U1RR47 76 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 CCDC78A2IDD5 438 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 FADS2P1A8MWK0 482 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 H7C0S8 307 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 FOXD2O60548 495 aaPredicted RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 MYCLP1P12525 358 aaPredicted RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 CTSKP43235 329 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 KIAA1024LP59773 190 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 BNC1Q01954 994 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 GUCY2DQ02846 1103 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 CAV1Q03135 178 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ITGA9Q13797 1035 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 NFATC4Q14934 902 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 CHRNA6Q15825 494 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 DNAJC21Q5F1R6 531 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 FNBP1LQ5T0N5 605 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 TCEAL6Q6IPX3 200 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 CASC4Q6P4E1 433 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SPATS2Q86XZ4 545 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 PDIK1LQ8N165 341 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 MPP5Q8N3R9 675 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 GPR161Q8N6U8 529 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SEC14L1Q92503 715 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 TCEAL3Q969E4 200 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 HIC2Q96JB3 615 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SIGLEC10Q96LC7 697 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ERVMER34-1Q9H9K5 563 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 PARD6AQ9NPB6 346 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 FSCN3Q9NQT6 498 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 GRHL1Q9NZI5 618 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SNX11Q9Y5W9 270 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 TMEM131Q92545 1883 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 INPP4BO15327 924 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 GFRA3O60609 400 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SRP72O76094 671 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 PRAMEF1O95521 474 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ENGP17813 658 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 TGM1P22735 817 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 KELP23276 732 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ARL4CP56559 192 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 XIAPP98170 497 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ACVR1Q04771 509 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 PEX6Q13608 980 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SF3A2Q15428 464 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 HIF1AQ16665 826 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ATP13A5Q4VNC0 1218 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 MACC1Q6ZN28 852 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 OR13J1Q8NGT2 312 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ZNF398Q8TD17 642 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ART4Q93070 314 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 TBATAQ96M53 351 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 ZNF778Q96MU6 729 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 VPS35Q96QK1 796 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 LGR4Q9BXB1 951 aa14.82□□□□□ -0.04
SUMO1-203ENST00000392246 DMGDHQ9UI17 866 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 CNOT6Q9ULM6 557 aaKnown RBP14.82□□□□□ -0.04
SUMO1-203ENST00000392246 SLC30A1Q9Y6M5 507 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms