RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TTC12Q9H892 705 aaPredicted RBP1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 PTPRCP08575 1304 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 A0A1W2PPI3 338 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 A0A1W2PPR1 153 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 ARHGAP10A1A4S6 786 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 HMX3A6NHT5 357 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 PLOD2O00469 737 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 PHOX2AO14813 284 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 EIF3DO15371 548 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 EML2O95834 649 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 CLPTM1O96005 669 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 HMBSP08397 361 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 PCNAP12004 261 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 ETFAP13804 333 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 CEBPBP17676 345 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 PTPN2P17706 415 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 EDN2P20800 178 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 AGAP20933 346 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 MAOAP21397 527 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 NFKBIAP25963 317 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 AHRP35869 848 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 NR2C2P49116 596 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 ANAPC15P60006 121 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 MS4A2Q01362 244 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 PTK2BQ14289 1009 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 KIR2DS3Q14952 304 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 C2orf68Q2NKX9 166 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 EDRF1Q3B7T1 1238 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 FASTKD1Q53R41 847 aaKnown RBP1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 SLC45A4Q5BKX6 768 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 SGO1Q5FBB7 561 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 TICAM1Q8IUC6 712 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 KIAA2013Q8IYS2 634 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 OR2C3Q8N628 320 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 PCDH20Q8N6Y1 951 aaKnown RBP1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 RBM15BQ8NDT2 890 aaKnown RBP1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 LINS1Q8NG48 757 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 SLC38A5Q8WUX1 472 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 EID2BQ96D98 161 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 KTI12Q96EK9 354 aaPredicted RBP1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 SYT15Q9BQS2 421 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 LRRC61Q9BV99 259 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 SARGQ9BW04 601 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 RTN4RQ9BZR6 473 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 TRIM6Q9C030 488 aaPredicted RBP1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 BABAM1Q9NWV8 329 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 ZDHHC2Q9UIJ5 367 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 CD207Q9UJ71 328 aa1.16□□□□□ -2.22
RNU6-239P-201ENST00000390990 FLT1P17948 1338 aa1.15□□□□□ -2.22
RNU6-239P-201ENST00000390990 C17orf113A0A1B0GUU1 675 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 SRRM5B3KS81 715 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 NCAM2O15394 837 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 ITGA2BP08514 1039 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 MYL3P08590 195 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 TRIM49P0CI25 452 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 TRIM49CP0CI26 452 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 TRIM27P14373 513 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 CSF2RAP15509 400 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 ITIH1P19827 911 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 WNT5AP41221 380 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 RAD23BP54727 409 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 SP3Q02447 781 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 MBTD1Q05BQ5 628 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 CHRNDQ07001 517 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 C2CD6Q53TS8 623 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZNF280DQ6N043 979 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 DUS1LQ6P1R4 473 aaKnown RBP1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 BRAT1Q6PJG6 821 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 RINLQ6ZS11 566 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 Q6ZSR9 355 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 SPATA6LQ8N4H0 392 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 ACVR1CQ8NER5 493 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZFAND2BQ8WV99 257 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 RASL10AQ92737 203 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 RHBDF1Q96CC6 855 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 QRFPRQ96P65 431 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 MYD88Q99836 296 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 NUF2Q9BZD4 464 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC32A1Q9H598 525 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 PPP1R3EQ9H7J1 279 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZBTB20Q9HC78 741 aaPredicted RBP1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 OBP2BQ9NPH6 170 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 CHST12Q9NRB3 414 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 MARCH4Q9P2E8 410 aaPredicted RBP1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 DNAJB4Q9UDY4 337 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 PADI3Q9ULW8 664 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 PRAG1Q86YV5 1406 aa1.15□□□□□ -2.23
RNU6-239P-201ENST00000390990 hCG_2014768A0A024R1R8 64 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 A0A087WW49 117 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 PABPN1LA6NDY0 278 aaKnown RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 TMEM202A6NGA9 273 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 LGALS16A8MUM7 142 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 EPM2AB3EWF7 344 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 E7EVH7 732 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLCO1B7G3V0H7 640 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 APAF1O14727 1248 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 PMM2O15305 246 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 FFAR2O15552 330 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SEPT4O43236 478 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms