RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 WASP42768 502 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 TIAL1Q01085 375 aaKnown RBP eCLIP12.15□□□□□ -0.473e-6■■□□□ 14.2
SPTBN1-203ENST00000389980 EIF4HQ15056 248 aaKnown RBP12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 INSCQ1MX18 579 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 HNRNPA1L2Q32P51 320 aaKnown RBP12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 EGFLAMQ63HQ2 1017 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 CGB2Q6NT52 195 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 C6orf89Q6UWU4 347 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 TMEM207Q6UWW9 146 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 GPR26Q8NDV2 337 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 LPGAT1Q92604 370 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 TMEM245Q9H330 911 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 CD84Q9UIB8 345 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 SLC30A1Q9Y6M5 507 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF106Q9H2Y7 1883 aaKnown RBP12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 COL6A3P12111 3177 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 C16orf96A6NNT2 1141 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 SRP72O76094 671 aaKnown RBP12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 BPGMP07738 259 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 KCNA5P22460 613 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 PCLAFQ15004 111 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 SPRED3Q2MJR0 410 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF805Q5CZA5 627 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 BRAT1Q6PJG6 821 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 MTSS1LQ765P7 747 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 TTC7BQ86TV6 843 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 ANKRD49Q8WVL7 239 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 PBXIP1Q96AQ6 731 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 NECTIN4Q96NY8 510 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 PITPNM3Q9BZ71 974 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 ABCG8Q9H221 673 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF395Q9H8N7 513 aaPredicted RBP12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 GPAMQ9HCL2 828 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 PCDH12Q9NPG4 1184 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 EPS15L1Q9UBC2 864 aa12.14□□□□□ -0.47
SPTBN1-203ENST00000389980 EDDM13A0A1B0GTR0 161 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 TK2O00142 265 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 C1SP09871 688 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CRABP2P29373 138 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 POLD2P49005 469 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GALK1P51570 392 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 POLR2LP62875 67 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CACNG1Q06432 222 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CSHL1Q14406 222 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CHI3L2Q15782 390 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CHRNA6Q15825 494 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 TXNDC11Q6PKC3 985 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 RGS9BPQ6ZS82 235 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 PARS2Q7L3T8 475 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 C10orf107Q8IVU9 208 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 HEXDCQ8WVB3 486 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 AARSD1Q9BTE6 412 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 ASB8Q9H765 288 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 NMRAL1Q9HBL8 299 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 INTS10Q9NVR2 710 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GALPQ9UBC7 116 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 ANKRD6Q9Y2G4 727 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 PLXNB3Q9ULL4 1909 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 ANHXE9PGG2 379 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 EPHX1P07099 455 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GSTA1P08263 222 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 SBK3P0C264 359 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CCDC166P0CW27 439 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GRIA2P42262 883 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 RGS19P49795 217 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 SEC13P55735 322 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 OVGP1Q12889 678 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 FAM45BPQ6NSW5 357 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 PIGWQ7Z7B1 504 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 SERPINA9Q86WD7 417 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 TMEM151AQ8N4L1 468 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GIMAP7Q8NHV1 300 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 FAM45AQ8TCE6 357 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 UCMAQ8WVF2 138 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GPR78Q96P69 363 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 FAM129BQ96TA1 746 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 BOCQ9BWV1 1114 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 ACSS2Q9NR19 701 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 IGSF5Q9NSI5 407 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 SIRPGQ9P1W8 387 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 THAP10Q9P2Z0 257 aaPredicted RBP12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 MED16Q9Y2X0 877 aa12.13□□□□□ -0.47
SPTBN1-203ENST00000389980 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms