RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 EEF1A1P5Q5VTE0 462 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 ASB18Q6ZVZ8 466 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 USP43Q70EL4 1123 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 MARK2Q7KZI7 788 aaKnown RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 HAPLN4Q86UW8 402 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 DCUN1D3Q8IWE4 304 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 HACE1Q8IYU2 909 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 RNF168Q8IYW5 571 aaPredicted RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 RNF113BQ8IZP6 322 aaKnown RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 DSELQ8IZU8 1212 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 KCNH5Q8NCM2 988 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 CSNK2A3Q8NEV1 391 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 SLC20A1Q8WUM9 679 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 CD101Q93033 1021 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 PIGTQ969N2 578 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 INTS12Q96CB8 462 aaKnown RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 KIF1BPQ96EK5 621 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 MMABQ96EY8 250 aaPredicted RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 PERPQ96FX8 193 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 C7orf26Q96N11 449 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 PGLYRP2Q96PD5 576 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 INPP4AQ96PE3 977 aaPredicted RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 SEC62Q99442 399 aaKnown RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 CSTL1Q9H114 145 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 VPS33BQ9H267 617 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 FBRSL1Q9HCM7 1045 aaKnown RBP2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 SDF2L1Q9HCN8 221 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 GPR108Q9NPR9 543 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 DLGAP2Q9P1A6 1054 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 MALT1Q9UDY8 824 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 PADI3Q9ULW8 664 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 ARHGAP26Q9UNA1 814 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 AMDHD2Q9Y303 409 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 LOXL2Q9Y4K0 774 aa2.25□□□□□ -2.05
RNU6-541P-201ENST00000384709 PTPRCP08575 1304 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 ZCWPW2A0A1B0GU75 182 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 B4E171 279 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 FAM90A26D6RGX4 464 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 VCYO14598 125 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SCAMP1O15126 338 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 KCNN4O15554 427 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SPINT2O43291 252 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 CREB3O43889 395 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 DDX58O95786 925 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 AGR2O95994 175 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 MYOD1P15172 320 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 ZNF23P17027 643 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 MARK3P27448 753 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 CORO1AP31146 461 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 ELF1P32519 619 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 TSPAN7P41732 249 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 TMPOP42166 694 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 NLRP5P59047 1200 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 MPP1Q00013 466 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 FOXM1Q08050 763 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 NIPAL4Q0D2K0 466 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 TMEM115Q12893 351 aaPredicted RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 RBM39Q14498 530 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 ZNF234Q14588 700 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 DPCR1Q3MIW9 517 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 CDONQ4KMG0 1287 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 DCST1Q5T197 706 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 CCNYL2Q5T2Q4 361 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 GFI1BQ5VTD9 330 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 C18orf63Q68DL7 685 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SIGIRRQ6IA17 410 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 FAM109BQ6ICB4 259 aaPredicted RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 RGMBQ6NW40 437 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 DUS1LQ6P1R4 473 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SLC36A4Q6YBV0 504 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 TMTC3Q6ZXV5 915 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 GSTA5Q7RTV2 222 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 R3HCC1LQ7Z5L2 792 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 DSG4Q86SJ6 1040 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 ZNF329Q86UD4 541 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 NR2C2APQ86WQ0 139 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 DIS3L2Q8IYB7 885 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SLC38A9Q8NBW4 561 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 TRPC4APQ8TEL6 797 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 APBB2Q92870 758 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 RRNAD1Q96FB5 475 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 GRAMD2BQ96HH9 432 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 UHRF2Q96PU4 802 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 NODALQ96S42 347 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 PIP5K1AQ99755 562 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SYT17Q9BSW7 474 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 LRRC1Q9BTT6 524 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 TRMT61BQ9BVS5 477 aaKnown RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 KIF9Q9HAQ2 790 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 SEBOXQ9HB31 216 aaPredicted RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 ACSS1Q9NUB1 689 aaPredicted RBP2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 MDFICQ9P1T7 246 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 CAMK2AQ9UQM7 478 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 PSAT1Q9Y617 370 aa2.24□□□□□ -2.05
RNU6-541P-201ENST00000384709 CYSRT1A8MQ03 144 aa2.23□□□□□ -2.05
RNU6-541P-201ENST00000384709 J3KRW8 73 aa2.23□□□□□ -2.05
RNU6-541P-201ENST00000384709 M0QZ24 198 aa2.23□□□□□ -2.05
RNU6-541P-201ENST00000384709 P2RY10O00398 339 aa2.23□□□□□ -2.05
RNU6-541P-201ENST00000384709 HCRTR2O43614 444 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms