RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 GTSF1Q8WW33 167 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 XAGE5Q8WWM1 108 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TANKQ92844 425 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SNAPC3Q92966 411 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KAT5Q92993 513 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MRGPRX4Q96LA9 322 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 OR1F2PQ96R84 312 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 USP28Q96RU2 1077 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ZNF607Q96SK3 696 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KCNJ15Q99712 375 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 FDXACB1Q9BRP7 624 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 C17orf80Q9BSJ5 609 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TEKT3Q9BXF9 490 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TMEM39BQ9GZU3 492 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CCDC8Q9H0W5 538 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 A4GALTQ9NPC4 353 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SIX2Q9NPC8 291 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PIGVQ9NUD9 493 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PANK4Q9NVE7 773 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SOHLH2Q9NX45 425 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TMEM9Q9P0T7 183 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 WRAP73Q9P2S5 460 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CCNL1Q9UK58 526 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CDH9Q9ULB4 789 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CDYLQ9Y232 598 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 UTYO14607 1347 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 RNF123Q5XPI4 1314 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MYPNQ86TC9 1320 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 YEATS2Q9ULM3 1422 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 DYSFO75923 2080 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGKV2D-26A0A0A0MRZ7 120 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 A0A0U1RQG5 324 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CPED1A4D0V7 1026 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SDHAF1A6NFY7 115 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RHPN2P1A8MT19 583 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FOXP2O15409 715 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KHDRBS3O75525 346 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RENP00797 406 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SCG5P05408 212 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 THEGLP0DJG4 465 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ATP1B2P14415 290 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ATP5JP18859 108 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PAX3P23760 479 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HNRNPH3P31942 346 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RPS10P46783 165 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DIO1P49895 249 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KHKP50053 298 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BCAR1P56945 870 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SLC6A3Q01959 620 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SP3Q02447 781 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ROM1Q03395 351 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SP140Q13342 867 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FKBP8Q14318 412 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MFSD13AQ14CX5 517 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RPS6KA1Q15418 735 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PRSS53Q2L4Q9 553 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TIMM50Q3ZCQ8 353 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SIRPB2Q5JXA9 342 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CATSPEREQ5SY80 951 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IRAK1BP1Q5VVH5 260 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AFMIDQ63HM1 303 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ARHGAP36Q6ZRI8 547 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SEM1Q6ZVN7 128 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BBS12Q6ZW61 710 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TMEM219Q86XT9 240 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AQP11Q8NBQ7 271 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OR2L3Q8NG85 312 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BBS10Q8TAM1 723 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 UBALD1Q8TB05 177 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SYN2Q92777 582 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TMEM19Q96HH6 336 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AGAP4Q96P64 663 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FNBP1Q96RU3 617 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 STRBPQ96SI9 672 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MYOCQ99972 504 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM173AQ9BQD7 235 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HIPK3Q9H422 1215 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 POLD4Q9HCU8 107 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCNS2Q9ULS6 477 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EDARQ9UNE0 448 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LAS1LQ9Y4W2 734 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CFAP46Q8IYW2 2715 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EYSQ5T1H1 3165 aa-2.29□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NCKAP5O14513 1909 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGLV5-45A0A087WSX0 123 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IQANK1A0A1B0GTG1 560 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CTAGE9A4FU28 777 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF487B1APH4 448 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RHODO00212 210 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OPHN1O60890 802 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 WDHD1O75717 1129 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PIAS2O75928 621 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ICAM1P05362 532 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NEFLP07196 543 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CENPBP07199 599 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 YES1P07947 543 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CTAGE8P0CG41 777 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GRK2P25098 689 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GSTT1P30711 240 aa-2.3□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms