RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 RAB10P61026 200 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 SEMA3AQ14563 771 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 MLF2Q15773 248 aaPredicted RBP24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 INSCQ1MX18 579 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 EOGTQ5NDL2 527 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 TAS2R42Q7RTR8 314 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 NRSN1Q8IZ57 195 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 ANKRD42Q8N9B4 389 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 MAFAQ8NHW3 353 aaPredicted RBP24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 KLF8O95600 359 aaPredicted RBP24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 ABCG1P45844 678 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 PRKCQQ04759 706 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 ZKSCAN8Q15776 578 aaPredicted RBP24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 PSAPL1Q6NUJ1 521 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF852Q6ZMS4 543 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 RAPH1Q70E73 1250 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 LDB1Q86U70 411 aaPredicted RBP24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 MDM1Q8TC05 714 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF398Q8TD17 642 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 LPGAT1Q92604 370 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 TSNARE1Q96NA8 513 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 CRLS1Q9UJA2 301 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 SCML1Q9UN30 329 aa24.44■■□□□ 1.5
ECHDC3-201ENST00000379215 TCF20Q9UGU0 1960 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 A0A096LPK6 155 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 TRBV5-4A0A0C4DH59 114 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 GOLGA8CPA6NN73 597 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 RPA3P35244 121 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 SFSWAPQ12872 951 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CCINQ13939 588 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 PDE1CQ14123 709 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 TMEM52BQ4KMG9 183 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 LIPIQ6XZB0 460 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 TXNDC5Q8NBS9 432 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 GPR26Q8NDV2 337 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 TCP10LQ8TDR4 215 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 DYDC1Q8WWB3 177 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 GRID1Q9ULK0 1009 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 SORCS3Q9UPU3 1222 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 VWA7Q9Y334 891 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF106Q9H2Y7 1883 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 A0A087X1B8 175 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 AGAP14A8MT82 685 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 NEMP1O14524 444 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 GAPDHSO14556 408 aaPredicted RBP24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 AP1G1O43747 822 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 COL6A2P12110 1019 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 P2RY2P41231 377 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CSRP3P50461 194 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 SEMG2Q02383 582 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 TFF2Q03403 129 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 ZBTB16Q05516 673 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CHRNA6Q15825 494 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF789Q5FWF6 425 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 HECTD2Q5U5R9 776 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CYP2U1Q7Z449 544 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CMC1Q7Z7K0 106 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 SLC41A1Q8IVJ1 513 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 PIANPQ8IYJ0 282 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 DENND1AQ8TEH3 1009 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 OMDQ99983 421 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 SLC13A1Q9BZW2 595 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 VPS11Q9H270 941 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 FAM83DQ9H4H8 585 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 POPDC3Q9HBV1 291 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 KCTD5Q9NXV2 234 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CRYL1Q9Y2S2 319 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 PCDHB1Q9Y5F3 818 aa24.43■■□□□ 1.5
ECHDC3-201ENST00000379215 CKAP5Q14008 2032 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 UBA6A0AVT1 1052 aaPredicted RBP24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 ANTXRLA6NF34 631 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 C2P06681 752 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 F7P08709 466 aaPredicted RBP24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF7P17097 686 aaPredicted RBP24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 IL9RQ01113 521 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 GUCY1A3Q02108 690 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 CNTN1Q12860 1018 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 MPP2Q14168 576 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 ITIH4Q14624 930 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF284Q2VY69 593 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 KYAT3Q6YP21 454 aaKnown RBP24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 HSD11B1LQ7Z5J1 315 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 RBFAQ8N0V3 343 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 AARSD1Q9BTE6 412 aaKnown RBP24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 ZSCAN5AQ9BUG6 496 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 CAB39LQ9H9S4 337 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 SMOXQ9NWM0 555 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 MRPS17Q9Y2R5 130 aaKnown RBP24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 PLLPQ9Y342 182 aa24.42■■□□□ 1.5
ECHDC3-201ENST00000379215 SPTBN5Q9NRC6 3674 aaKnown RBP24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 SCN8AQ9UQD0 1980 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 WNT9AO14904 365 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 MID1O15344 667 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 ADAM23O75077 832 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 ESR1P03372 595 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 SAT1P21673 171 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 ACRV1P26436 265 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 LIG3P49916 1009 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 METAP1P53582 386 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms