RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 FAM87AP0C7U9 286 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 CD1CP29017 333 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 HNRNPH3P31942 346 aaKnown RBP19.08■□□□□ 0.65
CBWD3-204ENST00000377349 GARSP41250 739 aaKnown RBP19.08■□□□□ 0.65
CBWD3-204ENST00000377349 GNPDA1P46926 289 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 POLD2P49005 469 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 ILF3Q12906 894 aaKnown RBP eCLIP19.08■□□□□ 0.65
CBWD3-204ENST00000377349 ODF2Q5BJF6 829 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 XKR5Q6UX68 686 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 RFLNAQ6ZTI6 216 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 USP45Q70EL2 814 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 TECPR1Q7Z6L1 1165 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 RCBTB1Q8NDN9 531 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 SCARF2Q96GP6 870 aaPredicted RBP19.08■□□□□ 0.65
CBWD3-204ENST00000377349 CHP1Q99653 195 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 ZNF670Q9BS34 389 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 POLR1EQ9GZS1 481 aaKnown RBP19.08■□□□□ 0.65
CBWD3-204ENST00000377349 SEPT10Q9P0V9 454 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 PHTF1Q9UMS5 762 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 NENFQ9UMX5 172 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 PPIL1Q9Y3C6 166 aa19.08■□□□□ 0.65
CBWD3-204ENST00000377349 LRRD1A4D1F6 860 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 PSMD11O00231 422 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 HGSO14964 777 aaPredicted RBP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 PPM1DO15297 605 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 MFAP3LO75121 409 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 PGLSO95336 258 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 IVLP07476 585 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 TMEM253P0C7T8 217 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 FGF3P11487 239 aaPredicted RBP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 CD82P27701 267 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 ALDH4A1P30038 563 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 CSF2RBP32927 897 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 CYP4F2P78329 520 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 CTBSQ01459 385 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 DSC2Q02487 901 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 PDK2Q15119 407 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 TBR1Q16650 682 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 TIGD7Q6NT04 549 aaPredicted RBP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 SLC30A9Q6PML9 568 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 SLC35G2Q8TBE7 412 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 SCRN2Q96FV2 425 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 CCDC74BQ96LY2 380 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 ZNF830Q96NB3 372 aaPredicted RBP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 SMIM14Q96QK8 99 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 NHEJ1Q9H9Q4 299 aaPredicted RBP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 RBM22Q9NW64 420 aaKnown RBP eCLIP19.08■□□□□ 0.64
CBWD3-204ENST00000377349 KCTD5Q9NXV2 234 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 CD84Q9UIB8 345 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 PLEKHM1Q9Y4G2 1056 aa19.08■□□□□ 0.64
CBWD3-204ENST00000377349 ZNF106Q9H2Y7 1883 aaKnown RBP19.07■□□□□ 0.64
CBWD3-204ENST00000377349 RHPN2P1A8MT19 583 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 ADCY8P40145 1251 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 ARSEP51690 589 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 NFKB2Q00653 900 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 GBE1Q04446 702 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 DPTQ07507 201 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 GALNT2Q10471 571 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 IHHQ14623 411 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 PAFAH1B3Q15102 231 aaKnown RBP19.07■□□□□ 0.64
CBWD3-204ENST00000377349 IFI16Q16666 785 aaKnown RBP19.07■□□□□ 0.64
CBWD3-204ENST00000377349 CLPPQ16740 277 aaPredicted RBP19.07■□□□□ 0.64
CBWD3-204ENST00000377349 RAET1GQ6H3X3 334 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 DOK6Q6PKX4 331 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 PRICKLE2Q7Z3G6 844 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 PIH1D2Q8WWB5 315 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 HAUS2Q9NVX0 235 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 HEY1Q9Y5J3 304 aa19.07■□□□□ 0.64
CBWD3-204ENST00000377349 LRRK2Q5S007 2527 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 SSU72P8A0A1W2PR75 194 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 TERTO14746 1132 aaKnown RBP19.06■□□□□ 0.64
CBWD3-204ENST00000377349 FZD6O60353 706 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 KRT1P04264 644 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 PDHA1P08559 390 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 GPR3P46089 330 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 LIMK2P53671 638 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 KCNC4Q03721 635 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 SQSTM1Q13501 440 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 NKAIN2Q5VXU1 208 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 NDUFAF2Q8N183 169 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 RAPGEF5Q92565 580 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 ANP32EQ9BTT0 268 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 TRIM4Q9C037 500 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 TMEM9Q9P0T7 183 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 LCMT1Q9UIC8 334 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 CHKBQ9Y259 395 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 PCDHGA3Q9Y5H0 932 aa19.06■□□□□ 0.64
CBWD3-204ENST00000377349 IGHV1OR21-1A0A087WYE8 117 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 MATN3O15232 486 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 THRAP10827 490 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 MAN1A1P33908 653 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 DYNLT1P63172 113 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 CLCA4Q14CN2 919 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 ASTE1Q2TB18 679 aaPredicted RBP19.05■□□□□ 0.64
CBWD3-204ENST00000377349 RALGPS1Q5JS13 557 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 FAM182AQ5T1J6 154 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 LRRC66Q68CR7 880 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 LRRC49Q8IUZ0 686 aa19.05■□□□□ 0.64
CBWD3-204ENST00000377349 TEX26Q8N6G2 289 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms