RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 HLA-DQB2P05538 268 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 TPM1P09493 284 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 LIPCP11150 499 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 RPL26P61254 145 aaKnown RBP20.93■□□□□ 0.94
VSX1-201ENST00000376707 IHHQ14623 411 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 NR1D2Q14995 579 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 CLPPQ16740 277 aaPredicted RBP20.93■□□□□ 0.94
VSX1-201ENST00000376707 USP53Q70EK8 1073 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 ZNF605Q86T29 641 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 NLRP8Q86W28 1048 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 NRSN1Q8IZ57 195 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 NAGSQ8N159 534 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 PQLC3Q8N755 202 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 EXD1Q8NHP7 514 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 ARRDC2Q8TBH0 407 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 RIOK2Q9BVS4 552 aaKnown RBP20.93■□□□□ 0.94
VSX1-201ENST00000376707 PCDH9Q9HC56 1237 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 RPL26L1Q9UNX3 145 aaKnown RBP20.93■□□□□ 0.94
VSX1-201ENST00000376707 PLEKHM1Q9Y4G2 1056 aa20.93■□□□□ 0.94
VSX1-201ENST00000376707 MGAQ8IWI9 3026 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 PRAMEF33A0A0G2JMD5 474 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 INPP4BO15327 924 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 PRAMEF10O60809 474 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 CLDN7O95471 211 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 ASMTLO95671 621 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 ETV5P41161 510 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 GPR3P46089 330 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 NIPAL4Q0D2K0 466 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 C16orf72Q14CZ0 275 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 TGIF1Q15583 401 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 GALNT13Q8IUC8 556 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 CCDC13Q8IYE1 715 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 USP7Q93009 1102 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 HDAC11Q96DB2 347 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 AGAP2Q99490 1192 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 CHP1Q99653 195 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 NUDT22Q9BRQ3 303 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 DTLQ9NZJ0 730 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 SEPT10Q9P0V9 454 aa20.92■□□□□ 0.94
VSX1-201ENST00000376707 MTA2O94776 668 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 PRLP01236 227 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 KDELR1P24390 212 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 SLC10A2Q12908 348 aaPredicted RBP20.91■□□□□ 0.94
VSX1-201ENST00000376707 LRP8Q14114 963 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 LY6DQ14210 128 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 MESDQ14696 234 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 PYCR3Q53H96 274 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 TMEM164Q5U3C3 297 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 RAVER1Q8IY67 606 aaKnown RBP20.91■□□□□ 0.94
VSX1-201ENST00000376707 RNF214Q8ND24 703 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 SLC35G2Q8TBE7 412 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 RAPGEF5Q92565 580 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 CCDC42Q96M95 316 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 RNF157Q96PX1 679 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 NHEJ1Q9H9Q4 299 aaPredicted RBP20.91■□□□□ 0.94
VSX1-201ENST00000376707 KALRNO60229 2985 aa20.91■□□□□ 0.94
VSX1-201ENST00000376707 GCN1Q92616 2671 aaKnown RBP20.9■□□□□ 0.94
VSX1-201ENST00000376707 C1orf232A0A0U1RR37 186 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 LRRD1A4D1F6 860 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 ZNF487B1APH4 448 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 PPM1DO15297 605 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 JCHAINP01591 159 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 CD1CP29017 333 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 CD86P42081 329 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 ARHGAP25P42331 645 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 RCBTB1Q8NDN9 531 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 COX14Q96I36 57 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 LYSMD1Q96S90 227 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 FOXJ2Q9P0K8 574 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 PCDHB11Q9Y5F2 797 aa20.9■□□□□ 0.94
VSX1-201ENST00000376707 IGHV5-10-1A0A0J9YXX1 117 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 KCNK1O00180 336 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 HGSO14964 777 aaPredicted RBP20.89■□□□□ 0.93
VSX1-201ENST00000376707 EFSO43281 561 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 TBX2Q13207 712 aaPredicted RBP20.89■□□□□ 0.93
VSX1-201ENST00000376707 NKAIN2Q5VXU1 208 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 ZNF574Q6ZN55 896 aaPredicted RBP20.89■□□□□ 0.93
VSX1-201ENST00000376707 ZFAND4Q86XD8 727 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 VSIG1Q86XK7 387 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 CNGA4Q8IV77 575 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 CCHCR1Q8TD31 782 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.89■□□□□ 0.93
VSX1-201ENST00000376707 CCDC74BQ96LY2 380 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 MLPHQ9BV36 600 aaPredicted RBP20.89■□□□□ 0.93
VSX1-201ENST00000376707 ADGRE3Q9BY15 652 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 ZMYND15Q9H091 742 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 SPTLC3Q9NUV7 552 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 KCNK4Q9NYG8 393 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 PKD2L2Q9NZM6 624 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 VPS18Q9P253 973 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 ZNHIT2Q9UHR6 403 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 HEY1Q9Y5J3 304 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 UNC13CQ8NB66 2214 aa20.89■□□□□ 0.93
VSX1-201ENST00000376707 IGHV1OR21-1A0A087WYE8 117 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 C9orf172C9J069 976 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 ATP1A1P05023 1023 aaKnown RBP20.88■□□□□ 0.93
VSX1-201ENST00000376707 CCL4P13236 92 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 PLA2G2AP14555 144 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 CD82P27701 267 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 SPINT3P49223 89 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms