RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CYP4X1Q8N118 509 aa17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 ATP6V1G3Q96LB4 118 aa17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 OMDQ99983 421 aa17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 WRAP53Q9BUR4 548 aaKnown RBP17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 INTS10Q9NVR2 710 aaKnown RBP17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 USP36Q9P275 1121 aaKnown RBP17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 CORO1CQ9ULV4 474 aaPredicted RBP17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 SLC30A1Q9Y6M5 507 aa17.15■□□□□ 0.34
HLA-DMA-201ENST00000374843 C10orf142B7Z368 130 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 WNT9AO14904 365 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 SPRP35270 261 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 ETV3P41162 512 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 TTPAP49638 278 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 DNAJC3Q13217 504 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 CTBP1Q13363 440 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 AGERQ15109 404 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 CHRNA6Q15825 494 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 TJAP1Q5JTD0 557 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 LGSNQ5TDP6 509 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 FAM151BQ6UXP7 276 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 CERS6Q6ZMG9 384 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 TIFABQ6ZNK6 161 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 Q6ZVL8 140 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 SDCCAG8Q86SQ7 713 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 NLRP8Q86W28 1048 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 PIANPQ8IYJ0 282 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 CXorf40AQ8TE69 158 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 MRRFQ96E11 262 aaKnown RBP17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 VPS39Q96JC1 886 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 GPR22Q99680 433 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 KDM4CQ9H3R0 1056 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 KCTD5Q9NXV2 234 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 SENP1Q9P0U3 644 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 VPS9D1Q9Y2B5 631 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 ACTL7BQ9Y614 415 aa17.14■□□□□ 0.33
HLA-DMA-201ENST00000374843 NEMP1O14524 444 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 S1PR4O95977 384 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 AHSGP02765 367 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 ITGA2BP08514 1039 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 MAGEA9P43362 315 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 MAGEA12P43365 314 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 CLCN5P51795 746 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 ADARP55265 1226 aaKnown RBP17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 DPTQ07507 201 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 SIGLEC14Q08ET2 396 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 ITGA9Q13797 1035 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 TMEM259Q4ZIN3 620 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 LYPLAL1Q5VWZ2 237 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 KIAA1161Q6NSJ0 714 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 PSAPL1Q6NUJ1 521 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 NEK5Q6P3R8 708 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 KIAA1324Q6UXG2 1013 aaKnown RBP17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 MTERF4Q7Z6M4 381 aaKnown RBP17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 TRABD2AQ86V40 505 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 SPEM1Q8N4L4 309 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 TRAM1L1Q8N609 369 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 LPGAT1Q92604 370 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 ULK4Q96C45 1275 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 ZSCAN5AQ9BUG6 496 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 FAM83DQ9H4H8 585 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 TBK1Q9UHD2 729 aa17.13■□□□□ 0.33
HLA-DMA-201ENST00000374843 TRIM49D1C9J1S8 452 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 RECQL5O94762 991 aaPredicted RBP17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 PRSS56P0CW18 603 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ACADMP11310 421 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 POLD2P49005 469 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 CSRP3P50461 194 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 TPMTP51580 245 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ACOX1Q15067 660 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ZRANB3Q5FWF4 1079 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 CWF19L1Q69YN2 538 aaKnown RBP17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 NXPE1Q8N323 547 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ZNF398Q8TD17 642 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ZBTB9Q96C00 473 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 NUS1Q96E22 293 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 VPS35Q96QK1 796 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ABCG8Q9H221 673 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 CENPHQ9H3R5 247 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ASB8Q9H765 288 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 FBXO6Q9NRD1 293 aaPredicted RBP17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 C2orf42Q9NWW7 574 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 NCKAP1Q9Y2A7 1128 aa17.12■□□□□ 0.33
HLA-DMA-201ENST00000374843 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 IGLV3-16A0A075B6K0 115 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 PFDN6O15212 129 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 GPR39O43194 453 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 MMP20O60882 483 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 F7P08709 466 aaPredicted RBP17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 ACRV1P26436 265 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 PMLP29590 882 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 CCNFP41002 786 aa17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
HLA-DMA-201ENST00000374843 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms