RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CAPN3P20807 821 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 FDXRP22570 491 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 CCL23P55773 120 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 TAF12Q16514 161 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 RBBP7Q16576 425 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 AAK1Q2M2I8 961 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 UGT3A2Q3SY77 523 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 PARP15Q460N3 678 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
RXRB-201ENST00000374680 CHSY3Q70JA7 882 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 SLAMF8Q9P0V8 285 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 SLC38A8A6NNN8 435 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 FAM155AB1AL88 458 aaPredicted RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 PRAMEF12O95522 483 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 MTHFD1P11586 935 aaKnown RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 GKP32189 559 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 ATP5C1P36542 298 aaKnown RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 STC1P52823 247 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 CLCQ05315 142 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 ATXN7L2Q5T6C5 722 aaPredicted RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 CCDC117Q8IWD4 279 aaPredicted RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 EEF1AKMT1Q8WVE0 214 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 AARSD1Q9BTE6 412 aaKnown RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 SCUBE2Q9NQ36 999 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 PLK2Q9NYY3 685 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 PRSS51A0A1B0GVH4 220 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 DRGXA6NNA5 263 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 ACSL4O60488 711 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 NBNO60934 754 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 PAPSS2O95340 614 aaPredicted RBP16.98■□□□□ 0.31
RXRB-201ENST00000374680 NDST3O95803 873 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 FGF1P05230 155 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 FESP07332 822 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 PIK3CGP48736 1102 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 HK2P52789 917 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 HERC3Q15034 1050 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 TCTN1Q2MV58 587 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 RABL3Q5HYI8 236 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 RNF219Q5W0B1 726 aaPredicted RBP16.98■□□□□ 0.31
RXRB-201ENST00000374680 TRAF7Q6Q0C0 670 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 DEFB128Q7Z7B8 93 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 CPNE9Q8IYJ1 553 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 CDYL2Q8N8U2 506 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 TMEM102Q8N9M5 508 aaPredicted RBP16.98■□□□□ 0.31
RXRB-201ENST00000374680 SLCO4A1Q96BD0 722 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 SLC25A23Q9BV35 468 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 MAP10Q9P2G4 905 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 NLRC5Q86WI3 1866 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 ANGPT2O15123 496 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 CLPTM1O96005 669 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 RHOCP08134 193 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 SPATA31D3P0C874 917 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 HLA-DPA1P20036 260 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 MYBPC1Q00872 1141 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 SPATA31D4Q6ZUB0 917 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 ASB9Q96DX5 294 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 FAR2Q96K12 515 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 RANBP9Q96S59 729 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 RNF38Q9H0F5 515 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 BCAP29Q9UHQ4 241 aa16.98■□□□□ 0.31
RXRB-201ENST00000374680 DOCK4Q8N1I0 1966 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 C2orf78A6NCI8 922 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 PLOD2O00469 737 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 GUCA1CO95843 209 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 ATP6V1B2P21281 511 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 GPX3P22352 226 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CORO1AP31146 461 aaKnown RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 MC4RP32245 332 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 ATN1P54259 1190 aaPredicted RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 NRG1Q02297 640 aaPredicted RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 SREBF2Q12772 1141 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 SETMARQ53H47 684 aaPredicted RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 RBM44Q6ZP01 1051 aaKnown RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 DHFR2Q86XF0 187 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 TMEM74Q96NL1 305 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 TAS2R13Q9NYV9 303 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CD274Q9NZQ7 290 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 POLG2Q9UHN1 485 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 MED16Q9Y2X0 877 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 RAI2Q9Y5P3 530 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 PTPRDP23468 1912 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 GREB1Q4ZG55 1949 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 AHCYL1O43865 530 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 RTN3O95197 1032 aaPredicted RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 ALPIP09923 528 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 ADSLP30566 484 aaPredicted RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 INHBEP58166 350 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 GPR17Q13304 367 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 KIAA1841Q6NSI8 718 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 ZFP1Q6P2D0 407 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CARNMT1Q8N4J0 409 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CD99L2Q8TCZ2 262 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 FEM1CQ96JP0 617 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 ATOH8Q96SQ7 321 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 DDX18Q9NVP1 670 aaKnown RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 EIF2B4Q9UI10 523 aaKnown RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 AGO1Q9UL18 857 aaKnown RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 FCF1Q9Y324 198 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms