RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 NOL9Q5SY16 702 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CRTC3Q6UUV7 619 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ABRAXAS1Q6UWZ7 409 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GPRIN1Q7Z2K8 1008 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GALNT5Q7Z7M9 940 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 STK32CQ86UX6 486 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CAMK1DQ8IU85 385 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PSTKQ8IV42 348 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ZBTB8OSQ8IWT0 167 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FBXO16Q8IX29 292 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 DEPDC4Q8N2C3 294 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 REPS2Q8NFH8 660 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 OR13F1Q8NGS4 319 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SHROOM3Q8TF72 1996 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FRS2Q8WU20 508 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MAML3Q96JK9 1138 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MAELQ96JY0 434 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SMIM14Q96QK8 99 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GPR22Q99680 433 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FICDQ9BVA6 458 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SNX25Q9H3E2 840 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SMOC2Q9H3U7 446 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PDZD7Q9H5P4 517 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 RNF167Q9H6Y7 350 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ABCB10Q9NRK6 738 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 IGSF5Q9NSI5 407 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CCM2LQ9NUG4 571 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 TBC1D13Q9NVG8 400 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GID8Q9NWU2 228 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SNTG2Q9NY99 539 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GIT1Q9Y2X7 761 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PCDHGA8Q9Y5G5 932 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SQORQ9Y6N5 450 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 LY75O60449 1722 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 H0YCG3 227 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 PLA2G6O60733 806 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 MITFO75030 526 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CABYRO75952 493 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 LRIG2O94898 1065 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 AP2A1O95782 977 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 B3GALT4O96024 378 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 STMN1P16949 149 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CYP2B6P20813 491 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GPX3P22352 226 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 ENPP1P22413 925 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 PROZP22891 400 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GTF2E2P29084 291 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 BMPR1AP36894 532 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CAPGP40121 348 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 POLD2P49005 469 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GSK3BP49841 420 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GP2P55259 537 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CDKN2DP55273 166 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 RAB10P61026 200 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GHRHRQ02643 423 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 EPS8Q12929 822 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 STXBP2Q15833 593 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 ATP6AP1Q15904 470 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 INAQ16352 499 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 NKG7Q16617 165 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CELF3Q5SZQ8 465 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 IQSEC1Q6DN90 963 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 LAIR1Q6GTX8 287 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 LAIR2Q6ISS4 152 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 RWDD4Q6NW29 188 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 RGMBQ6NW40 437 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 SLCO6A1Q86UG4 719 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 LRRC49Q8IUZ0 686 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CLEC4FQ8N1N0 589 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 ANKRD52Q8NB46 1076 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 PCYOX1LQ8NBM8 494 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 FAM83FQ8NEG4 500 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 PSMA8Q8TAA3 256 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 APBB2Q92870 758 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GFM2Q969S9 779 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 PTERQ96BW5 349 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 SNX27Q96L92 541 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 TEPSINQ96N21 525 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 BARD1Q99728 777 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 MCMBPQ9BTE3 642 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 C11orf84Q9BUA3 381 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 BBS2Q9BXC9 721 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 EIF2AQ9BY44 585 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 NIFKQ9BYG3 293 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 FAM49AQ9H0Q0 323 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 ING2Q9H160 280 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 UPF3AQ9H1J1 476 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 C2orf40Q9H1Z8 148 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 GBA3Q9H227 469 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 RAD21L1Q9H4I0 556 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 SMARCAD1Q9H4L7 1026 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 FAM96AQ9H5X1 160 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 NTN4Q9HB63 628 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 SEMA4BQ9NPR2 832 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 SETD4Q9NVD3 440 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 SMPD3Q9NY59 655 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 MARCH4Q9P2E8 410 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 CNOT11Q9UKZ1 510 aaKnown RBP5.4□□□□□ -1.54
ATG4A-204ENST00000372246 AKT3Q9Y243 479 aa5.4□□□□□ -1.54
ATG4A-204ENST00000372246 DNAJC15Q9Y5T4 150 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms