RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 PAQR3Q6TCH7 311 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 PCDH20Q8N6Y1 951 aaKnown RBP20.5■□□□□ 0.87
VEGFA-204ENST00000372064 SNX31Q8N9S9 440 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 PHC3Q8NDX5 983 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 STAG3L4Q8TBR4 150 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 CYP2S1Q96SQ9 504 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 AKTIPQ9H8T0 292 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 YIPF1Q9Y548 306 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 RAI2Q9Y5P3 530 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 OAS3Q9Y6K5 1087 aaKnown RBP20.5■□□□□ 0.87
VEGFA-204ENST00000372064 SNAP91O60641 907 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 CXCL10P02778 98 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 ATP6V0D1P61421 351 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 ARF5P84085 180 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 TAF12Q16514 161 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 GRAMD1BQ3KR37 738 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 TICAM1Q8IUC6 712 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 ICA1LQ8NDH6 482 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 BIRC8Q96P09 236 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 KLF16Q9BXK1 252 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-204ENST00000372064 MID1IP1Q9NPA3 183 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 ADA2Q9NZK5 511 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 HSFX1Q9UBD0 423 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 SRP72O76094 671 aaKnown RBP20.49■□□□□ 0.87
VEGFA-204ENST00000372064 HDCP19113 662 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 GPX3P22352 226 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 PAOXQ6QHF9 649 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 PHYKPLQ8IUZ5 450 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 FBRSL1Q9HCM7 1045 aaKnown RBP20.49■□□□□ 0.87
VEGFA-204ENST00000372064 IKZF3Q9UKT9 509 aa20.49■□□□□ 0.87
VEGFA-204ENST00000372064 AZIN1O14977 448 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 ABLIM3O94929 683 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 CD160O95971 181 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 LPOP22079 712 aaPredicted RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 RAD51Q06609 339 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 TRIM25Q14258 630 aaKnown RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 FUNDC1Q8IVP5 155 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 LILRA2Q8N149 483 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 ZNF296Q8WUU4 475 aaPredicted RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 TWIST2Q8WVJ9 160 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 DCUN1D1Q96GG9 259 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 LRGUKQ96M69 825 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 NSUN5Q96P11 429 aaKnown RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 DDX50Q9BQ39 737 aaKnown RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 SPAG4Q9NPE6 437 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 HACD3Q9P035 362 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 A0A0U1RQS6 177 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 NRP2O60462 931 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 CLASP2O75122 1294 aaKnown RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 NDUFS3O75489 264 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 CD9P21926 228 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 RARS2Q5T160 578 aaKnown RBP20.48■□□□□ 0.87
VEGFA-204ENST00000372064 EFHBQ8N7U6 833 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 FAM156AQ8NDB6 213 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 CD300AQ9UGN4 299 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 VPS9D1Q9Y2B5 631 aa20.48■□□□□ 0.87
VEGFA-204ENST00000372064 MAP3K13O43283 966 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 C1RP00736 705 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ZCCHC18P0CG32 403 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 GFAPP14136 432 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 FOXA1P55317 472 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 GRM2Q14416 872 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 PIANPQ8IYJ0 282 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 OR9I1Q8NGQ6 314 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 CCDC68Q9H2F9 335 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TMEM181Q9P2C4 612 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 STOML2Q9UJZ1 356 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 RNF112Q9ULX5 631 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 FNDC3AQ9Y2H6 1198 aaKnown RBP20.47■□□□□ 0.87
VEGFA-204ENST00000372064 CAPN8A6NHC0 703 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ANKRD66B4E2M5 251 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 MRASO14807 208 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 KLK8O60259 260 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TMCC1O94876 653 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 C8BP07358 591 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ATXN3P54252 364 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TRAP1Q12931 704 aaKnown RBP20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TRAF2Q12933 501 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 RNF220Q5VTB9 566 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 CATSPER1Q8NEC5 780 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ADCY4Q8NFM4 1077 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 C1QTNF3Q9BXJ4 246 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ADGRE3Q9BY15 652 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 EPS15L1Q9UBC2 864 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 FKBPLQ9UIM3 349 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 PIP5K1BO14986 540 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ECI2O75521 394 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TCN1P20061 433 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-204ENST00000372064 STX1BP61266 288 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 LCP2Q13094 533 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 PSAPL1Q6NUJ1 521 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 FBXL19Q6PCT2 694 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 ZNF783Q6ZMS7 281 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 FBXO39Q8N4B4 442 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TRMT2BQ96GJ1 504 aaKnown RBP20.47■□□□□ 0.87
VEGFA-204ENST00000372064 DEFB118Q96PH6 123 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 GPR21Q99679 349 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 YIPF3Q9GZM5 350 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 TUBB1Q9H4B7 451 aa20.47■□□□□ 0.87
VEGFA-204ENST00000372064 COPS7BQ9H9Q2 264 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms