RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ASB8Q9H765 288 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 POPDC3Q9HBV1 291 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 PCDH12Q9NPG4 1184 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 RUVBL2Q9Y230 463 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 GRXCR2A6NFK2 248 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 GAPDHSO14556 408 aaPredicted RBP26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 NPC1O15118 1278 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 FDXRP22570 491 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 IL12RB1P42701 662 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 CDKN2DP55273 166 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 CENPLQ8N0S6 344 aaPredicted RBP26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 KCTD4Q8WVF5 259 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 PLEKHG4BQ96PX9 1271 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 P2RY13Q9BPV8 354 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 PKD2L2Q9NZM6 624 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 COMMD10Q9Y6G5 202 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 XIRP2A4UGR9 3374 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 HNRNPLP14866 589 aaKnown RBP eCLIP26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 FMO4P31512 558 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 TNFRSF4P43489 277 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 GALK1P51570 392 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 PGGT1BP53609 377 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 FAM83EQ2M2I3 478 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 AAK1Q2M2I8 961 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 LRRC73Q5JTD7 316 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 ERAP2Q6P179 960 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 PIP4K2CQ8TBX8 421 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 GRAMD1AQ96CP6 724 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 PPP1R16AQ96I34 528 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 COPG2Q9UBF2 871 aa26.17■■□□□ 1.78
ATPAF1-202ENST00000371937 BGNP21810 368 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 KCNA5P22460 613 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 ITGB7P26010 798 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 SOX9P48436 509 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 SMAD4Q13485 552 aaKnown RBP26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 EGFLAMQ63HQ2 1017 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 ATG16L1Q676U5 607 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 GPR26Q8NDV2 337 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 RDH11Q8TC12 318 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 ZNF398Q8TD17 642 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 FAM129BQ96TA1 746 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 MECRQ9BV79 373 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 SARDHQ9UL12 918 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 SCN8AQ9UQD0 1980 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 TRBV5-4A0A0C4DH59 114 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 EPHX1P07099 455 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 CPA3P15088 417 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 SPINT3P49223 89 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 SUOXP51687 545 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 AGAP9Q5VTM2 703 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 FAM47EQ6ZV65 393 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 DPPA4Q7L190 304 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 PIGWQ7Z7B1 504 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 FBRSL1Q9HCM7 1045 aaKnown RBP26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 TRPV5Q9NQA5 729 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 RAD18Q9NS91 495 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 TAS2R13Q9NYV9 303 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 HCN2Q9UL51 889 aa26.16■■□□□ 1.78
ATPAF1-202ENST00000371937 ZNF106Q9H2Y7 1883 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 EDF1O60869 148 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 ESR1P03372 595 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 C1SP09871 688 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 PKMP14618 531 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 CHRNA6Q15825 494 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 POM121L1PQ3SYA9 428 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 KLC3Q6P597 504 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 PARS2Q7L3T8 475 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 SERPINA9Q86WD7 417 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 NXNL1Q96CM4 212 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 SCYL1Q96KG9 808 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 UBXN10Q96LJ8 280 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 BIRC8Q96P09 236 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 CACNA2D2Q9NY47 1150 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 CRLS1Q9UJA2 301 aa26.15■■□□□ 1.78
ATPAF1-202ENST00000371937 C2CD4DB7Z1M9 353 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 DNAJC6O75061 913 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 RHOBTB1O94844 696 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 LTA4HP09960 611 aaKnown RBP26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 ZNF7P17097 686 aaPredicted RBP26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 CD9P21926 228 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 MLLT1Q03111 559 aaPredicted RBP26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 ENPP2Q13822 863 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 CHI3L2Q15782 390 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 ZSCAN26Q16670 478 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 PLCD3Q8N3E9 789 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 SREK1Q8WXA9 508 aaKnown RBP26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 GPR78Q96P69 363 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 ELAC2Q9BQ52 826 aaKnown RBP26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 UBE2ZQ9H832 354 aaPredicted RBP26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 SLCO1B3Q9NPD5 702 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 PRSS16Q9NQE7 514 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 PCDHB1Q9Y5F3 818 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 STON1Q9Y6Q2 735 aa26.14■■□□□ 1.78
ATPAF1-202ENST00000371937 AGAP14A8MT82 685 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 C1QTNF3-AMACRE9PGA6 284 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 SOX1O00570 391 aaPredicted RBP26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 PRMT5O14744 637 aaPredicted RBP26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 MBTPS2O43462 519 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 OR1I1O60431 355 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 WISP3O95389 354 aaPredicted RBP26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms