RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 C6orf62Q9GZU0 229 aaPredicted RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 OSBPL2Q9H1P3 480 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 MINDY3Q9H8M7 445 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 GABRDO14764 452 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 FGF19O95750 216 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ESR1P03372 595 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 NOS3P29474 1203 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 SPIDRQ14159 915 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 VWA5B1Q5TIE3 1220 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ARHGAP22Q7Z5H3 698 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 DDX1Q92499 740 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 HIPK3Q9H422 1215 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 PCDH12Q9NPG4 1184 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 VPS4AQ9UN37 437 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 SAMHD1Q9Y3Z3 626 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 GOLGA4Q13439 2230 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 GRM6O15303 877 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 INSIG1O15503 277 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 EIF2S1P05198 315 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CFHP08603 1231 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 UMPSP11172 480 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 TLX1P31314 330 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CDH5P33151 784 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 IDH3AP50213 366 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 USP46P62068 366 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 SLC25A11Q02978 314 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 DGCR6Q14129 220 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 TIGD5Q53EQ6 642 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CDC73Q6P1J9 531 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 RINLQ6ZS11 566 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CLEC4CQ8WTT0 213 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 LPGAT1Q92604 370 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 MCM8Q9UJA3 840 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 POLR3HQ9Y535 204 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 NPEPPSL1A6NEC2 478 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ONECUT3O60422 494 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 SPAM1P38567 509 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 POLR2JP52435 117 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 THOP1P52888 689 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ABRQ12979 859 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ISLR2Q6UXK2 745 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 RELL1Q8IUW5 271 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 MPP5Q8N3R9 675 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 DCAKDQ8WVC6 231 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ROPN1LQ96C74 230 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 HMCESQ96FZ2 354 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 Q96MT0 163 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 LRTM1Q9HBL6 345 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 GDAP2Q9NXN4 497 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 SAMD4AQ9UPU9 718 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 PDE4DIPQ5VU43 2346 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ARFGEF2Q9Y6D5 1785 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 LINC00854A0A1B0GVQ3 168 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CAPN8A6NHC0 703 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 KLF11O14901 512 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 GLUD1P00367 558 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 UROSP10746 265 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 KHDC1Q4VXA5 237 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 USP39Q53GS9 565 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 LPCAT4Q643R3 524 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 PHC3Q8NDX5 983 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 REXO5Q96IC2 774 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 AGAP2Q99490 1192 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 NUAK2Q9H093 628 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 RSL24D1Q9UHA3 163 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 RAB26Q9ULW5 256 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 Q9Y3F1 56 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 PDE9AO76083 593 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 GPIP06744 558 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ELFN1P0C7U0 828 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 KCNE1P15382 129 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 MSX2P35548 267 aaPredicted RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 KIR3DL1P43629 444 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 ATP1A4Q13733 1029 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 KCNJ11Q14654 390 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 GLYATQ6IB77 296 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 EPHX4Q8IUS5 362 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 FAM47BQ8NA70 645 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 PHF10Q8WUB8 498 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 MYDGFQ969H8 173 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 DNAJC1Q96KC8 554 aaKnown RBP11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 SEZ6LQ9BYH1 1024 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 DNAJC11Q9NVH1 559 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CNTN3Q9P232 1028 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 CFAP97Q9P2B7 532 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 SLC45A1Q9Y2W3 748 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 FADS3Q9Y5Q0 445 aa11.81□□□□□ -0.52
DEPDC1-201ENST00000370966 FAM159BA6NKW6 160 aa11.8□□□□□ -0.52
DEPDC1-201ENST00000370966 VAV1P15498 845 aa11.8□□□□□ -0.52
DEPDC1-201ENST00000370966 TCF4P15884 667 aa11.8□□□□□ -0.52
DEPDC1-201ENST00000370966 CCNA2P20248 432 aa11.8□□□□□ -0.52
DEPDC1-201ENST00000370966 PTGER3P43115 390 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms