RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 C9orf172C9J069 976 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.1■□□□□ 0.01
RPF1-202ENST00000370656 LRIG2O94898 1065 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 PCCBP05166 539 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 LIG3P49916 1009 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 HDAC4P56524 1084 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 CYP4F2P78329 520 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 UGP2Q16851 508 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 LONRF2Q1L5Z9 754 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 ATP13A4Q4VNC1 1196 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 TXNRD3NBQ6F5E7 133 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 AADACL2Q6P093 401 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 BORAQ6PGQ7 559 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 PSTKQ8IV42 348 aaKnown RBP15.1■□□□□ 0.01
RPF1-202ENST00000370656 SLITRK4Q8IW52 837 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 OR56A4Q8NGH8 313 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 PDXPQ96GD0 296 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 DPEP2Q9H4A9 486 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 PCDH12Q9NPG4 1184 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 ANKMY1Q9P2S6 941 aa15.1■□□□□ 0.01
RPF1-202ENST00000370656 B4DGG1 531 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 FAM72CH0Y354 149 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 CPNE6O95741 557 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 RARAP10276 462 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 DESP17661 470 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 CETN2P41208 172 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 CDKN2BP42772 138 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 YBEYP58557 167 aaPredicted RBP15.09■□□□□ 0.01
RPF1-202ENST00000370656 KIAA1024LP59773 190 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 UBAP2LQ14157 1087 aaKnown RBP15.09■□□□□ 0.01
RPF1-202ENST00000370656 HLTFQ14527 1009 aaKnown RBP eCLIP15.09■□□□□ 0.01
RPF1-202ENST00000370656 CLCA4Q14CN2 919 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 CLPPQ16740 277 aaPredicted RBP15.09■□□□□ 0.01
RPF1-202ENST00000370656 C15orf59Q2T9L4 293 aaPredicted RBP15.09■□□□□ 0.01
RPF1-202ENST00000370656 TEX35Q5T0J7 233 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 FAM72AQ5TYM5 149 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 FAM72DQ6L9T8 149 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 WDR93Q6P2C0 686 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 BRAT1Q6PJG6 821 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 FAM72BQ86X60 149 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 PRELID2Q8N945 189 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 GPBAR1Q8TDU6 330 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 FAM172AQ8WUF8 416 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 HTR3CQ8WXA8 447 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 RAPGEF5Q92565 580 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 ZNF641Q96N77 438 aaPredicted RBP15.09■□□□□ 0.01
RPF1-202ENST00000370656 PEBP4Q96S96 227 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 OSBPL8Q9BZF1 889 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 SUV39H2Q9H5I1 410 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 LRRC19Q9H756 370 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 NBASA2RRP1 2371 aa15.09■□□□□ 0.01
RPF1-202ENST00000370656 TNFRSF10CO14798 259 aa15.08■□□□□ 0
RPF1-202ENST00000370656 HGSO14964 777 aaPredicted RBP15.08■□□□□ 0
RPF1-202ENST00000370656 PIGNO95427 931 aa15.08■□□□□ 0
RPF1-202ENST00000370656 WT1P19544 449 aaPredicted RBP15.08■□□□□ 0
RPF1-202ENST00000370656 KDELR1P24390 212 aa15.08■□□□□ 0
RPF1-202ENST00000370656 BIRC2Q13490 618 aa15.08■□□□□ 0
RPF1-202ENST00000370656 PDK2Q15119 407 aa15.08■□□□□ 0
RPF1-202ENST00000370656 PARP15Q460N3 678 aa15.08■□□□□ 0
RPF1-202ENST00000370656 MFSD7Q6UXD7 560 aa15.08■□□□□ 0
RPF1-202ENST00000370656 SPOCD1Q6ZMY3 1216 aa15.08■□□□□ 0
RPF1-202ENST00000370656 IL22RA1Q8N6P7 574 aa15.08■□□□□ 0
RPF1-202ENST00000370656 PAF1Q8N7H5 531 aa15.08■□□□□ 0
RPF1-202ENST00000370656 RTL3Q8N8U3 475 aaKnown RBP15.08■□□□□ 0
RPF1-202ENST00000370656 OR1E3Q8WZA6 343 aa15.08■□□□□ 0
RPF1-202ENST00000370656 TAAR9Q96RI9 348 aa15.08■□□□□ 0
RPF1-202ENST00000370656 HERPUD2Q9BSE4 406 aa15.08■□□□□ 0
RPF1-202ENST00000370656 SEMA6CQ9H3T2 930 aa15.08■□□□□ 0
RPF1-202ENST00000370656 HOMER3Q9NSC5 361 aa15.08■□□□□ 0
RPF1-202ENST00000370656 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.08■□□□□ 0
RPF1-202ENST00000370656 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
RPF1-202ENST00000370656 TUBD1Q9UJT1 453 aa15.08■□□□□ 0
RPF1-202ENST00000370656 V9GYY5 206 aaPredicted RBP15.08■□□□□ 0
RPF1-202ENST00000370656 ZFC3H1O60293 1989 aaKnown RBP15.07■□□□□ 0
RPF1-202ENST00000370656 UTP20O75691 2785 aaKnown RBP15.07■□□□□ 0
RPF1-202ENST00000370656 hCG_1818297A0A087WSY0 165 aa15.07■□□□□ 0
RPF1-202ENST00000370656 TSPAN11A1L157 253 aa15.07■□□□□ 0
RPF1-202ENST00000370656 CFAP69A5D8W1 941 aa15.07■□□□□ 0
RPF1-202ENST00000370656 RHPN2P1A8MT19 583 aa15.07■□□□□ 0
RPF1-202ENST00000370656 PRPSAP2O60256 369 aa15.07■□□□□ 0
RPF1-202ENST00000370656 HOXC4P09017 264 aaPredicted RBP15.07■□□□□ 0
RPF1-202ENST00000370656 H2AFXP16104 143 aaPredicted RBP15.07■□□□□ 0
RPF1-202ENST00000370656 EPHB2P29323 1055 aa15.07■□□□□ 0
RPF1-202ENST00000370656 MMP12P39900 470 aa15.07■□□□□ 0
RPF1-202ENST00000370656 CCR10P46092 362 aa15.07■□□□□ 0
RPF1-202ENST00000370656 AIF1P55008 147 aa15.07■□□□□ 0
RPF1-202ENST00000370656 KCNAB2Q13303 367 aa15.07■□□□□ 0
RPF1-202ENST00000370656 C16orf72Q14CZ0 275 aa15.07■□□□□ 0
RPF1-202ENST00000370656 AMZ1Q400G9 498 aa15.07■□□□□ 0
RPF1-202ENST00000370656 RAB6CQ53S08 254 aa15.07■□□□□ 0
RPF1-202ENST00000370656 TFDP3Q5H9I0 405 aa15.07■□□□□ 0
RPF1-202ENST00000370656 DRICH1Q6PGQ1 229 aaPredicted RBP15.07■□□□□ 0
RPF1-202ENST00000370656 PTRH1Q86Y79 214 aaKnown RBP15.07■□□□□ 0
RPF1-202ENST00000370656 JPH3Q8WXH2 748 aaPredicted RBP15.07■□□□□ 0
RPF1-202ENST00000370656 SEC14L1Q92503 715 aa15.07■□□□□ 0
RPF1-202ENST00000370656 SLCO2A1Q92959 643 aa15.07■□□□□ 0
RPF1-202ENST00000370656 NTAN1Q96AB6 310 aa15.07■□□□□ 0
RPF1-202ENST00000370656 FUBP1Q96AE4 644 aaKnown RBP15.07■□□□□ 0
RPF1-202ENST00000370656 FAF2Q96CS3 445 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms