RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 PLEKHG4Q58EX7 1191 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 TMEM63BQ5T3F8 832 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 UBR7Q8N806 425 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 NPAS2Q99743 824 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 LEF1Q9UJU2 399 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 MYRFQ9Y2G1 1151 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.52□□□□□ -1.04
ABCA4-201ENST00000370225 TPST2O60704 377 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 RECQL5O94762 991 aaPredicted RBP8.52□□□□□ -1.04
ABCA4-201ENST00000370225 COX4I1P13073 169 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 SPAM1P38567 509 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 TSC22D1Q15714 1073 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 LIPMQ5VYY2 423 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 GALNT5Q7Z7M9 940 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 KREMEN2Q8NCW0 462 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 CYB5D2Q8WUJ1 264 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 LCN9Q8WX39 176 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF607Q96SK3 696 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 ACE2Q9BYF1 805 aaPredicted RBP8.52□□□□□ -1.04
ABCA4-201ENST00000370225 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.52□□□□□ -1.04
ABCA4-201ENST00000370225 CORO2BQ9UQ03 480 aa8.52□□□□□ -1.04
ABCA4-201ENST00000370225 B4DGG1 531 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 WNT7AO00755 349 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 DCLK1O15075 740 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 RPP40O75818 363 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PRAMEF1O95521 474 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 ZBTB11O95625 1053 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 RCVRNP35243 200 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 DGKGP49619 791 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 CACNA2D1P54289 1103 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 NRLP54845 237 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SLC34A1Q06495 639 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 KRR1Q13601 381 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 ZACNQ401N2 412 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 FAM91A1Q658Y4 838 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 JAZF1Q86VZ6 243 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SPATA22Q8NHS9 363 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 KAT2AQ92830 837 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 LRRC39Q96DD0 335 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 EBNA1BP2Q99848 306 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 C3orf14Q9HBI5 128 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 MCUBQ9NWR8 336 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 L1RE1Q9UN81 338 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 VWA7Q9Y334 891 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 RWDD3Q9Y3V2 267 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SAMHD1Q9Y3Z3 626 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TMEM131LA2VDJ0 1609 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 LRRC72A6NJI9 287 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 AZIN1O14977 448 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 EFNA1P20827 205 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 ELP6Q0PNE2 266 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 NR1D2Q14995 579 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PARP15Q460N3 678 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 CPTPQ5TA50 214 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TATDN1Q6P1N9 297 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 BEND7Q8N7W2 519 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SLC43A3Q8NBI5 491 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 ZNF540Q8NDQ6 660 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 APOLD1Q96LR9 279 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PAIP1Q9H074 479 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 NOL6Q9H6R4 1146 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 GLOD4Q9HC38 313 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PNPOQ9NVS9 261 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 FBXO5Q9UKT4 447 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 C2orf71A6NGG8 1288 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SAP18O00422 153 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PRNPP04156 253 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SAGP10523 405 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 HOXB8P17481 243 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 HSPB3Q12988 150 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 GRM3Q14832 879 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 XKR4Q5GH76 650 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 HECTD2Q5U5R9 776 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TXNDC11Q6PKC3 985 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 AHI1Q8N157 1196 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 DBF4BQ8NFT6 615 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 ADAMTS15Q8TE58 950 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 XAGE5Q8WWM1 108 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 HIC2Q96JB3 615 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PDCD10Q9BUL8 212 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 POLMQ9NP87 494 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TMEM138Q9NPI0 162 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TIMM22Q9Y584 194 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 ARHGEF28Q8N1W1 1705 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SERPINB7O75635 380 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 TIPRLO75663 272 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 C22orf31O95567 290 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 WARSP23381 471 aaKnown RBP8.52□□□□□ -1.05
ABCA4-201ENST00000370225 GDI1P31150 447 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 HOXC12P31275 282 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 C2orf80Q0P641 193 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SCRN3Q0VDG4 424 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 SLC13A2Q13183 592 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 NDUFA9Q16795 377 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 BEND5Q7L4P6 421 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 OR10H5Q8NGA6 315 aa8.52□□□□□ -1.05
ABCA4-201ENST00000370225 PIWIL2Q8TC59 973 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms