RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SETD9Q8NE22 299 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 LINGO1Q96FE5 620 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PPP3R2Q96LZ3 170 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SLC4A5Q9BY07 1137 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 HIPK3Q9H422 1215 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SNX6Q9UNH7 406 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 AP3M1Q9Y2T2 418 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 RFX3P48380 749 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 QPRTQ15274 297 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 CDCA2Q69YH5 1023 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-204ENST00000368210 UTS2BQ765I0 119 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 STARD8Q92502 1023 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SLC25A51Q9H1U9 297 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SYNDIG1Q9H7V2 258 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PRPF19Q9UMS4 504 aaKnown RBP13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PHF24Q9UPV7 400 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SNX10Q9Y5X0 201 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 MATN3O15232 486 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 PLIN3O60664 434 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 NOVP48745 357 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 ALDH6A1Q02252 535 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 MAPKAPK3Q16644 382 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 DET1Q7L5Y6 550 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 OR4K2Q8NGD2 314 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 S100A14Q9HCY8 104 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 EHD3Q9NZN3 535 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 KCNH1O95259 989 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 NDST3O95803 873 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 MT-CYBP00156 380 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 OTCP00480 354 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 C1RP00736 705 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 FGFR3P22607 806 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 GABRR2P28476 465 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 HECTD2Q5U5R9 776 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 TRMT10BQ6PF06 316 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 HTRA1Q92743 480 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 HSPBAP1Q96EW2 488 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 DEFB118Q96PH6 123 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 COPS8Q99627 209 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 SLC39A3Q9BRY0 314 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 CRNNQ9UBG3 495 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 KPNA5O15131 536 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 SNAP91O60641 907 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 RPN2P04844 631 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 TACR2P21452 398 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 SLC9A3P48764 834 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 RABGGTBP53611 331 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 KLF10Q13118 480 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 RBM20Q5T481 1227 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 DOK6Q6PKX4 331 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 RBFAQ8N0V3 343 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 CRYBG2Q8N1P7 616 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 FIBCD1Q8N539 461 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 HS6ST1O60243 411 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 RPP40O75818 363 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 IPO13O94829 963 aaKnown RBP13.23□□□□□ -0.29
PTPRK-204ENST00000368210 METTL18O95568 372 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 COX7A2P14406 83 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 DSC2Q02487 901 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 TIMM50Q3ZCQ8 353 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 FAM228AQ86W67 206 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 OR6K2Q8NGY2 324 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
PTPRK-204ENST00000368210 KCNU1A8MYU2 1149 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 MAGEC1O60732 1142 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TCEA3O75764 348 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 GABBR2O75899 941 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 RECQL5O94762 991 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 HOXD12P35452 270 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TALDO1P37837 337 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 GLUD2P49448 558 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TIGD5Q53EQ6 642 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PAGE2BQ5JRK9 111 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 LYPLAL1Q5VWZ2 237 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 FAM151BQ6UXP7 276 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 KIAA0408Q6ZU52 694 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 NAT8LQ8N9F0 302 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 BANPQ8N9N5 519 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 GSTCDQ8NEC7 633 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 C7orf43Q8WVR3 580 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TPD52L3Q96J77 140 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 RAD18Q9NS91 495 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms