RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 LTB4R2Q9NPC1 389 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 DMAP1Q9NPF5 467 aaPredicted RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CISHQ9NSE2 258 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 IFNKQ9P0W0 207 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ARHGAP26Q9UNA1 814 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CNTN6Q9UQ52 1028 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CCL26Q9Y258 94 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 MRPS17Q9Y2R5 130 aaKnown RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 CHST2Q9Y4C5 530 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 PAXBP1Q9Y5B6 917 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CEP250Q9BV73 2442 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ATP8B3O60423 1300 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TRAV19A0A0A6YYK7 116 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 A0A1B0GTW7 788 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TMEM233B4DJY2 109 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 MYO1CO00159 1063 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 CLDN5O00501 218 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TRIM24O15164 1050 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 OAS1P00973 400 aaKnown RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 SERPINC1P01008 464 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 ZDHHC11BP0C7U3 371 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 PNMA6AP0CW24 399 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 UCHL3P15374 230 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 CD58P19256 250 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TRIM21P19474 475 aaKnown RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 FDXRP22570 491 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TBXAS1P24557 533 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 YWHAQP27348 245 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 RAD23BP54727 409 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 UBASH3AP57075 661 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TPM4P67936 248 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 SLC7A9P82251 487 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 ZNF844Q08AG5 666 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 PRKD1Q15139 912 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 ANGPT1Q15389 498 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 ZNF77Q15935 545 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 PDCD4Q53EL6 469 aaKnown RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 FAM209BQ5JX69 171 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 C10orf62Q5T681 223 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 TPRG1Q6ZUI0 275 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 GDF7Q7Z4P5 450 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 RALGPS2Q86X27 583 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 YAF2Q8IY57 180 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 NUP93Q8N1F7 819 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 MPP5Q8N3R9 675 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 C12orf29Q8N999 325 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 SLC4A11Q8NBS3 891 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 STKLD1Q8NE28 680 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 ZMIZ2Q8NF64 920 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 SHC3Q92529 594 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 SLC22A12Q96S37 553 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 KCNK16Q96T55 309 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 SMOQ99835 787 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 ANP32EQ9BTT0 268 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 SPATA5L1Q9BVQ7 753 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 KRTAP4-11Q9BYQ6 195 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 UBE2TQ9NPD8 197 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 ETAA1Q9NY74 926 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 TRPM5Q9NZQ8 1165 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 VSX1Q9NZR4 365 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 DNAJC12Q9UKB3 198 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 CNOT11Q9UKZ1 510 aaKnown RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 PADI4Q9UM07 663 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 MAGED2Q9UNF1 606 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 MTF2Q9Y483 593 aaPredicted RBP8.06□□□□□ -1.12
YBX3-204ENST00000366290 PIAS3Q9Y6X2 628 aa8.06□□□□□ -1.12
YBX3-204ENST00000366290 NCOR2Q9Y618 2525 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 HHLA1C9JL84 531 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 NCAM2O15394 837 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 VPS4BO75351 444 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 SCAF4O95104 1147 aaKnown RBP8.05□□□□□ -1.12
YBX3-204ENST00000366290 CALCAP01258 141 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 DCNP07585 359 aaKnown RBP8.05□□□□□ -1.12
YBX3-204ENST00000366290 TPM2P07951 284 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 CCDC130P13994 396 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 ACRV1P26436 265 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 HSD11B2P80365 405 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 ZXDBP98169 803 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 TAF10Q12962 218 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 ZNF528Q3MIS6 628 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 FILIP1LQ4L180 1135 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 ARHGAP17Q68EM7 881 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 CLEC20AQ6ZU45 233 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 C1orf210Q8IVY1 113 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 MAML2Q8IZL2 1156 aaPredicted RBP8.05□□□□□ -1.12
YBX3-204ENST00000366290 ZNF276Q8N554 614 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 RNF152Q8N8N0 203 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 CPT1CQ8TCG5 803 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 SLC2A14Q8TDB8 520 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 OSCP1Q8WVF1 389 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 NELL1Q92832 810 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 JAKMIP2Q96AA8 810 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 SLITRK1Q96PX8 696 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 TRIB1Q96RU8 372 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 CYP2S1Q96SQ9 504 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 TEX101Q9BY14 249 aa8.05□□□□□ -1.12
YBX3-204ENST00000366290 UBXN6Q9BZV1 441 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms