RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 PAMP19021 973 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 MGAT1P26572 445 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CSNK1EP49674 416 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 TERF1P54274 439 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CLDN2P57739 230 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 NXPH1P58417 271 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CDK3Q00526 305 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 SEPT6Q14141 434 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 HIF1AQ16665 826 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 GPR33Q49SQ1 333 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 MACC1Q6ZN28 852 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CEP128Q6ZU80 1094 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 OR13H1Q8NG92 308 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CDKN2AIPNLQ96HQ2 116 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 COX14Q96I36 57 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 SIGLEC10Q96LC7 697 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 BPIFA1Q9NP55 256 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 GDF3Q9NR23 364 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 TREX1Q9NSU2 369 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 SMOXQ9NWM0 555 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 GRHL1Q9NZI5 618 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CD84Q9UIB8 345 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 SLCO1B1Q9Y6L6 691 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 E7ESA3 106 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 H0Y8X5 98 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 YKT6O15498 198 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 AVILO75366 819 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 SRP72O76094 671 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 PRAMEF1O95521 474 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 SLC4A1P02730 911 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 CFIP05156 583 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 CTSKP43235 329 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 THOP1P52888 689 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 XIAPP98170 497 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 GUCY2DQ02846 1103 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 NFATC2Q13469 925 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 CUL1Q13616 776 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 NFATC4Q14934 902 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 CCDC38Q502W7 563 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 RFLNAQ6ZTI6 216 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 TMEM135Q86UB9 458 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 HEATR4Q86WZ0 1026 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 OR13J1Q8NGT2 312 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 HEXDCQ8WVB3 486 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 BTN2A2Q8WVV5 523 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 ULK4Q96C45 1275 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 DNAJC1Q96KC8 554 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 MYOCQ99972 504 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 DPH5Q9H2P9 285 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 CHRAC1Q9NRG0 131 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 SYBUQ9NX95 663 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 KCTD3Q9Y597 815 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 LRRK1Q38SD2 2015 aa13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 ZFHX2Q9C0A1 2572 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-201ENST00000361439 A0A1B0GVT2 93 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 K7ESM1 405 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 GAPDHSO14556 408 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 BUD23O43709 281 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 USP1O94782 785 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 SLU7O95391 586 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 CER1O95813 267 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 POLBP06746 335 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 ITGALP20701 1170 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 PPARGP37231 505 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 BLKP51451 505 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 PLTPP55058 493 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 CACNG1Q06432 222 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 PEX6Q13608 980 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 PDE1CQ14123 709 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 KCTD19Q17RG1 926 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 KIF19Q2TAC6 998 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 LDLRAP1Q5SW96 308 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 AFTPHQ6ULP2 937 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 FAM151BQ6UXP7 276 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 CENPUQ71F23 418 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 PARGQ86W56 976 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 PHYKPLQ8IUZ5 450 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 SLC22A18ASQ8N1D0 253 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 EIF1ADQ8N9N8 165 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 ZNF398Q8TD17 642 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 SCG3Q8WXD2 468 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 GLYATL1Q969I3 302 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 FUBP1Q96AE4 644 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 STAMBPL1Q96FJ0 436 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 TBATAQ96M53 351 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 WDR92Q96MX6 357 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms