RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 TUBA4AP68366 448 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 NRF1Q16656 503 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 PPP1R3AQ16821 1122 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 ZNF789Q5FWF6 425 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 TPGS2Q68CL5 300 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 CLYBLQ8N0X4 340 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 RTL3Q8N8U3 475 aaKnown RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 ATAD1Q8NBU5 361 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 SPPL3Q8TCT6 385 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 TRPC4APQ8TEL6 797 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 POF1BQ8WVV4 589 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 ASB2Q96Q27 587 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 SEMA6AQ9H2E6 1030 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 MYRFQ9Y2G1 1151 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 SNX13Q9Y5W8 968 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 IRAK3Q9Y616 596 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 GREB1Q4ZG55 1949 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 BBIP1A8MTZ0 92 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
UBA3-202ENST00000361055 ABLIM3O94929 683 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 CXCL14O95715 111 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 FGF4P08620 206 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 CDH2P19022 906 aaPredicted RBP12.38□□□□□ -0.43
UBA3-202ENST00000361055 GPX3P22352 226 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 RENBPP51606 427 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 MLLT6P55198 1093 aaPredicted RBP12.38□□□□□ -0.43
UBA3-202ENST00000361055 USP46P62068 366 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 RAB33AQ14088 237 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 UGT3A2Q3SY77 523 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 C6orf10Q5SRN2 563 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 ZNF678Q5SXM1 525 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 SPRED2Q7Z698 418 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 AMIGO2Q86SJ2 522 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 ISCA2Q86U28 154 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 GOLM1Q8NBJ4 401 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 HM13Q8TCT9 377 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 PHF21BQ96EK2 531 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
UBA3-202ENST00000361055 C1orf74Q96LT6 269 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 CCT7Q99832 543 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 TCF25Q9BQ70 676 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 TMEM79Q9BSE2 394 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 ATXN3LQ9H3M9 355 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 TLR9Q9NR96 1032 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 VPS45Q9NRW7 570 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 PNPLA3Q9NST1 481 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 OLAHQ9NV23 265 aa12.38□□□□□ -0.43
UBA3-202ENST00000361055 AFF4Q9UHB7 1163 aaKnown RBP12.38□□□□□ -0.43
UBA3-202ENST00000361055 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
UBA3-202ENST00000361055 UBFD1O14562 309 aaKnown RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 VNN2O95498 520 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 S1PR4O95977 384 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 HDCP19113 662 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 CA8P35219 290 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 ERVFC1P60507 584 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 NFKB2Q00653 900 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 PRKCQQ04759 706 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 UNC50Q53HI1 259 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 HMBOX1Q6NT76 420 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 ISLR2Q6UXK2 745 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 ZBTB49Q6ZSB9 765 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 KDELC2Q7Z4H8 507 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 CILP2Q8IUL8 1156 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 ERI1Q8IV48 349 aaKnown RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 FUNDC1Q8IVP5 155 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 SCN4BQ8IWT1 228 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 PACRGLQ8N7B6 248 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 OR2T34Q8NGX1 318 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 C8orf48Q96LL4 319 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 GPATCH1Q9BRR8 931 aaKnown RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 SMOC2Q9H3U7 446 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 CCM2LQ9NUG4 571 aaPredicted RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 NDFIP2Q9NV92 336 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 NDUFAF1Q9Y375 327 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 MYO16Q9Y6X6 1858 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 MROH6A6NGR9 719 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 TEX28O15482 410 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 HTRA2O43464 458 aaPredicted RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 CSPG5O95196 566 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 PEX11BO96011 259 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 SLC5A2P31639 672 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 KCNC1P48547 511 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 CDK9P50750 372 aaKnown RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 STX1BP61266 288 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 RALGDSQ12967 914 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 DUSP4Q13115 394 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms