RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MARCH4Q9P2E8 410 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC39A10Q9ULF5 831 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 DUSP12Q9UNI6 340 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 VPS9D1Q9Y2B5 631 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 STARD13Q9Y3M8 1113 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC30A1Q9Y6M5 507 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 OTOGLQ3ZCN5 2332 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 SRRM3A6NNA2 597 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 C1QTNF3-AMACRE9PGA6 284 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 KPNA3O00505 521 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CLDN7O95471 211 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 S1PR4O95977 384 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 HNRNPLP14866 589 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 DRD1P21728 446 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 VIPR1P32241 457 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 LSP1P33241 339 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CRHR1P34998 444 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 SPAM1P38567 509 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 IL12RB1P42701 662 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CCT5P48643 541 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 STC1P52823 247 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC12A2P55011 1212 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 IL9RQ01113 521 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 POU4F1Q01851 419 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CACNG1Q06432 222 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 GRSF1Q12849 480 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 ARHGEF7Q14155 803 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CDKN3Q16667 212 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 ZRANB3Q5FWF4 1079 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 ZDHHC20Q5W0Z9 365 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 LRRC66Q68CR7 880 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CWF19L1Q69YN2 538 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CNSTQ6PJW8 725 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 LVRNQ6Q4G3 990 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CRTC1Q6UUV9 634 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 TAX1BP1Q86VP1 789 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 CBARPQ8N350 705 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 GPATCH11Q8N954 259 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 PIP4K2CQ8TBX8 421 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 DENND1AQ8TEH3 1009 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 TSPAN17Q96FV3 270 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 PPP1R16AQ96I34 528 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 ELMO2Q96JJ3 720 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 TSNARE1Q96NA8 513 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 VPS11Q9H270 941 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 MLXIPLQ9NP71 852 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 B4GALT6Q9UBX8 382 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 SORCS3Q9UPU3 1222 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 ANKRD6Q9Y2G4 727 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 R4GN57 208 aa13.8□□□□□ -0.2
PDLIM5-203ENST00000359265 C16orf96A6NNT2 1141 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 MAN2B1O00754 1011 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 NDUFS3O75489 264 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 HAUS5O94927 633 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 EPHX1P07099 455 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 GSTA1P08263 222 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TIMP2P16035 220 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 STMN1P16949 149 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 ITGALP20701 1170 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 ITGB7P26010 798 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TTPAP49638 278 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 PEX6Q13608 980 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 PDE1CQ14123 709 aaPredicted RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 SEMA3AQ14563 771 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 LRRC14Q15048 493 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 PON2Q15165 354 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TERF2Q15554 542 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 INSCQ1MX18 579 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TMEM196Q5HYL7 178 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 FAM45BPQ6NSW5 357 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 ERAP2Q6P179 960 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 PARS2Q7L3T8 475 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TRMT11Q7Z4G4 463 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 CMC1Q7Z7K0 106 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 LDB1Q86U70 411 aaPredicted RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TSPAN33Q86UF1 283 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 ZNF513Q8N8E2 541 aaPredicted RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 GDAP1Q8TB36 358 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 FAM45AQ8TCE6 357 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TTC1Q99614 292 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 PAIP2Q9BPZ3 127 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC13A1Q9BZW2 595 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 CCDC134Q9H6E4 229 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 DYRK4Q9NR20 520 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 CACNA2D2Q9NY47 1150 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 PKD2L2Q9NZM6 624 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 DCDC2Q9UHG0 476 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 TLK1Q9UKI8 766 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 GRID1Q9ULK0 1009 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 FNDC3AQ9Y2H6 1198 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 STON1Q9Y6Q2 735 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 ATG2BQ96BY7 2078 aa13.79□□□□□ -0.2
PDLIM5-203ENST00000359265 A0A096LPK6 155 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 GLYATL1P3A0A0U1RQE8 302 aa13.78□□□□□ -0.2
PDLIM5-203ENST00000359265 A0A0U1RQS6 177 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms