RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KDM1BQ8NB78 822 aa11.15□□□□□ -0.62
SSU72-202ENST00000359060 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
SSU72-202ENST00000359060 NOL11Q9H8H0 719 aaKnown RBP11.15□□□□□ -0.62
SSU72-202ENST00000359060 EVLQ9UI08 416 aaPredicted RBP11.15□□□□□ -0.62
SSU72-202ENST00000359060 PTGDR2Q9Y5Y4 395 aa11.15□□□□□ -0.62
SSU72-202ENST00000359060 ARHGAP10A1A4S6 786 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 CDC7O00311 574 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 PRAMEF11O60813 436 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 ADAMTS4O75173 837 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 S1PR4O95977 384 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 ARSAP15289 507 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 LEPRP48357 1165 aaKnown RBP11.15□□□□□ -0.63
SSU72-202ENST00000359060 ATP6V0D1P61421 351 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 IRX1P78414 480 aaPredicted RBP11.15□□□□□ -0.63
SSU72-202ENST00000359060 MTA1Q13330 715 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 DENND5AQ6IQ26 1287 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 TTC33Q6PID6 262 aaPredicted RBP11.15□□□□□ -0.63
SSU72-202ENST00000359060 GPRIN3Q6ZVF9 776 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 KBTBD2Q8IY47 623 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 CCDC138Q96M89 665 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 NSUN5Q96P11 429 aaKnown RBP11.15□□□□□ -0.63
SSU72-202ENST00000359060 UNC93B1Q9H1C4 597 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 AKTIPQ9H8T0 292 aa11.15□□□□□ -0.63
SSU72-202ENST00000359060 A0A0U1RQS6 177 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 SNUPNO95149 360 aaKnown RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 FASP25445 335 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 CCNHP51946 323 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 SH3BGRP55822 239 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 HERVK_113P63132 956 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 CEACAM7Q14002 265 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 TRIM25Q14258 630 aaKnown RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 TTLL9Q3SXZ7 439 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 KDELC1Q6UW63 502 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 LRRC43Q8N309 656 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 RIN3Q8TB24 985 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 AUTS2Q8WXX7 1259 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 MTFMTQ96DP5 389 aaKnown RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 C2orf49Q9BVC5 232 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 ERVK-6Q9BXR3 956 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 ACTR8Q9H981 624 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 A0A1W2PQ45 241 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 A0A1W2PQY0 241 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 FAM149AA5PLN7 773 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 ENPP3O14638 875 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 RAD51BO15315 384 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 MT-ND1P03886 318 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 NNMTP40261 264 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 AASDHQ4L235 1098 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 APLFQ8IW19 511 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 ARL14EPQ8N8R7 260 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 KLHDC9Q8NEP7 349 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 LRTOMTQ8WZ04 291 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 MRM3Q9HC36 420 aaKnown RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 POLR3BQ9NW08 1133 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 KLQ9UEF7 1012 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 FAF1Q9UNN5 650 aaPredicted RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 IQCF5A8MTL0 148 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 H3BMM5 538 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 CPOXP36551 454 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 MAGEA11P43364 429 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 ARCN1P48444 511 aaKnown RBP11.14□□□□□ -0.63
SSU72-202ENST00000359060 LCP2Q13094 533 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 CLEC14AQ86T13 490 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 SPPL2CQ8IUH8 684 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 VPS33AQ96AX1 596 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 RNF145Q96MT1 663 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 SMIM14Q96QK8 99 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 ZFP14Q9HCL3 533 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 PKD2L2Q9NZM6 624 aa11.14□□□□□ -0.63
SSU72-202ENST00000359060 ARVCFO00192 962 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 TNFAIP8O95379 198 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 GSTT1P30711 240 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 BOP1Q14137 746 aaKnown RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 IL23RQ5VWK5 629 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 BEND5Q7L4P6 421 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 CDK15Q96Q40 435 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 FNIP2Q9P278 1114 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 PRMT5O14744 637 aaPredicted RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 TNFRSF10BO14763 440 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 TMCC1O94876 653 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 OR4F21O95013 312 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 GALTP07902 379 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 C1QTNF8P60827 252 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 HSPA14Q0VDF9 509 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 SMARCB1Q12824 385 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 IKBKEQ14164 716 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 LIMS2Q7Z4I7 341 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 GALPQ9UBC7 116 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 SLC8A2Q9UPR5 921 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 EIF3LQ9Y262 564 aaKnown RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 hCG_2014768A0A024R1R8 64 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 PAPSS2O95340 614 aaPredicted RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 MLYCDO95822 493 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms