RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 GALPQ9UBC7 116 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 PLA2G4CQ9UP65 541 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 MED16Q9Y2X0 877 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 NEMP2A6NFY4 417 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 ASLP04424 464 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 APOA4P06727 396 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 HOXB8P17481 243 aaPredicted RBP11.92□□□□□ -0.5
SYN3-202ENST00000358763 FCHO2Q0JRZ9 810 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 RUNX3Q13761 415 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 DBN1Q16643 649 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 CTSL3PQ5NE16 218 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 KIAA1958Q8N8K9 716 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 GPR26Q8NDV2 337 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 PBXIP1Q96AQ6 731 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 BIRC8Q96P09 236 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 TCF12Q99081 682 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 S1PR5Q9H228 398 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 MRPL46Q9H2W6 279 aaKnown RBP11.92□□□□□ -0.5
SYN3-202ENST00000358763 POMKQ9H5K3 350 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 THAP1Q9NVV9 213 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.92□□□□□ -0.5
SYN3-202ENST00000358763 IL36AQ9UHA7 158 aa11.92□□□□□ -0.5
SYN3-202ENST00000358763 CORO1CQ9ULV4 474 aaPredicted RBP11.92□□□□□ -0.5
SYN3-202ENST00000358763 GLYATL1P3A0A0U1RQE8 302 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TARM1B6A8C7 271 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 WISP3O95389 354 aaPredicted RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 SRPRAP08240 638 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 CHRNA6Q15825 494 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TECRLQ5HYJ1 363 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 AGAP9Q5VTM2 703 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 LCA5Q86VQ0 697 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CRLF3Q8IUI8 442 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CCT6BQ92526 530 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 UBXN10Q96LJ8 280 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 MCCC1Q96RQ3 725 aaPredicted RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 LYSMD1Q96S90 227 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 GPR21Q99679 349 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 ABCG8Q9H221 673 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 ALG9Q9H6U8 611 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 DNAJC16Q9Y2G8 782 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TCF20Q9UGU0 1960 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 IQCF5A8MTL0 148 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 DLX3O60479 287 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TRIM13O60858 407 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 LAMP2P13473 410 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 ZNF37AP17032 561 aaPredicted RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 TFEBP19484 476 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 GDI1P31150 447 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 BMP8BP34820 402 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 GJA4P35212 333 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 SPAM1P38567 509 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 OPRD1P41143 372 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CCR10P46092 362 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 METAP1P53582 386 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 PTSQ03393 145 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 AARS2Q5JTZ9 985 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 SERPINA9Q86WD7 417 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CPA6Q8N4T0 437 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TERB1Q8NA31 727 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 EXT2Q93063 718 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 SLC30A3Q99726 388 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 BOCQ9BWV1 1114 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 GATA5Q9BWX5 397 aaPredicted RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 TMEM120AQ9BXJ8 343 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CYP4F12Q9HCS2 524 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 SARS2Q9NP81 518 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 OXSMQ9NWU1 459 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CD84Q9UIB8 345 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 MID2Q9UJV3 735 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 USH1CQ9Y6N9 552 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 ZBTB14O43829 449 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 IL1BP01584 269 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 C1SP09871 688 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 PKMP14618 531 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 PSMC3P17980 439 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 ITGALP20701 1170 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 KPNA2P52292 529 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 ABCE1P61221 599 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 NFATC2Q13469 925 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 SETMARQ53H47 684 aaPredicted RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 KLC3Q6P597 504 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 PAQR3Q6TCH7 311 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 STK40Q8N2I9 435 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 MICALL1Q8N3F8 863 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 FITM2Q8N6M3 262 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TXNDC5Q8NBS9 432 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 AGR3Q8TD06 166 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■■■■■ 62.8
SYN3-202ENST00000358763 SORT1Q99523 831 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 MRPL57Q9BQC6 102 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 KCNK13Q9HB14 408 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
SYN3-202ENST00000358763 PPIL1Q9Y3C6 166 aa11.91□□□□□ -0.5
SYN3-202ENST00000358763 KPNA3O00505 521 aaPredicted RBP11.9□□□□□ -0.5
SYN3-202ENST00000358763 GRK2P25098 689 aa11.9□□□□□ -0.5
SYN3-202ENST00000358763 BRAT1Q6PJG6 821 aa11.9□□□□□ -0.5
SYN3-202ENST00000358763 PLPP6Q8IY26 295 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms