RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 BNIP2Q12982 314 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SIM2Q14190 667 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 RFTN1Q14699 578 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MFSD10Q14728 455 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 DUS1LQ6P1R4 473 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CRTC3Q6UUV7 619 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 GCNT7Q6ZNI0 430 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FKBP9P1Q75LS8 142 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CENPSQ8N2Z9 138 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TOP6BLQ8N6T0 577 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ARRDC4Q8NCT1 418 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ELMO1Q92556 727 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 HPS1Q92902 700 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 HMCESQ96FZ2 354 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PAAF1Q9BRP4 392 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SMURF2Q9HAU4 748 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 WDR6Q9NNW5 1121 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 LATS2Q9NRM7 1088 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CATSPERZQ9NTU4 200 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC38A7Q9NVC3 462 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TAS2R13Q9NYV9 303 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TRIM17Q9Y577 477 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 DNAJC15Q9Y5T4 150 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SH3PXD2BA1X283 911 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PIRO00625 290 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PFDN6O15212 129 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SH3BGRLO75368 114 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CDK14O94921 469 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TBX18O95935 607 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 GOT2P00505 430 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 GSNP06396 782 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ALDOCP09972 364 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 AGTR2P50052 363 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 LAPTM4AQ15012 233 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC39A12Q504Y0 691 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 KIAA0930Q6ICG6 404 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FAM45BPQ6NSW5 357 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PAQR3Q6TCH7 311 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 C14orf80Q86SX3 495 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 GPR180Q86V85 440 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ABI1Q8IZP0 508 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TRPV3Q8NET8 790 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 LPCAT1Q8NF37 534 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FAM45AQ8TCE6 357 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ABHD8Q96I13 439 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 GLT1D1Q96MS3 346 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FCRL5Q96RD9 977 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SEPT5Q99719 369 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 C16orf70Q9BSU1 422 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 VTA1Q9NP79 307 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 COMMD8Q9NX08 183 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 GALPQ9UBC7 116 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SEPT3Q9UH03 358 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 LEF1Q9UJU2 399 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 DERAQ9Y315 318 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PKP3Q9Y446 797 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC30A1Q9Y6M5 507 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CCL15-CCL14A0A0B4J2E2 113 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 E9PAM4 449 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 H3BMQ9 156 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 I6L893 689 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CDC7O00311 574 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 AP1G1O43747 822 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 RAMP2O60895 175 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 XYLBO75191 536 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 DLGAP3O95886 979 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CNPP09543 421 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 IMPDH2P12268 514 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 DNAJB2P25686 324 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 KCNC1P48547 511 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 POLR2JP52435 117 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TBX4P57082 545 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TXNL4AP83876 142 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 DAB2P98082 770 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 APOFQ13790 326 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TGFBIQ15582 683 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 FSCN1Q16658 493 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CCL15Q16663 113 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 MEP1AQ16819 746 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PGS1Q32NB8 556 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CCDC92Q53HC0 331 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 UNC50Q53HI1 259 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF678Q5SXM1 525 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SLCO6A1Q86UG4 719 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 HEATR4Q86WZ0 1026 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CARM1Q86X55 608 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 C2CD4AQ8NCU7 369 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SMG8Q8ND04 991 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 STAG3L4Q8TBR4 150 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 NUDT8Q8WV74 236 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CASP10Q92851 521 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 NTAN1Q96AB6 310 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SLCO4A1Q96BD0 722 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 COG8Q96MW5 612 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SLC9A7Q96T83 725 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GPR21Q99679 349 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 NFKBIZQ9BYH8 718 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms