RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 RACK1P63244 317 aaKnown RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 CLCQ05315 142 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 CBLBQ13191 982 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 STK11Q15831 433 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 AARS2Q5JTZ9 985 aaKnown RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TMEM184AQ6ZMB5 413 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 GPR141Q7Z602 305 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 MARK4Q96L34 752 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 LGMNQ99538 433 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TMEM79Q9BSE2 394 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 SLC46A2Q9BY10 475 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 ATXN3LQ9H3M9 355 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 ITM2CQ9NQX7 267 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 NDFIP2Q9NV92 336 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 MPP6Q9NZW5 540 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 CASQ2O14958 399 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 KCNN4O15554 427 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TYROBPO43914 113 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 LYPLA1O75608 230 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 YAP1P46937 504 aaKnown RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 ALFQ53S48 1182 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 ADGRF1Q5T601 910 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 RNASEH2BQ5TBB1 312 aaKnown RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 NIPAL1Q6NVV3 410 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 LRRC49Q8IUZ0 686 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 DENND1CQ8IV53 801 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 ZC3H7AQ8IWR0 971 aaKnown RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 DCLK2Q8N568 766 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 HTR3CQ8WXA8 447 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 HTRA1Q92743 480 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 FATE1Q969F0 183 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TIFAQ96CG3 184 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 RANBP9Q96S59 729 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 CGREF1Q99674 301 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TUBB6Q9BUF5 446 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 SLC2A11Q9BYW1 496 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 GIMAP4Q9NUV9 329 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 EPS15L1Q9UBC2 864 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 SOX13Q9UN79 622 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 CPQQ9Y646 472 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TRAV19A0A0A6YYK7 116 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 LOC105371267A0A1B0GV96 52 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TMEM114B3SHH9 223 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 CNTN5O94779 1100 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 MYL4P12829 197 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 EPHA3P29320 983 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 MAGEA6P43360 314 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 MAPKAPK2P49137 400 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 GPS1Q13098 491 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 STXBP5Q5T5C0 1151 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 HTR3DQ70Z44 454 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 RBM23Q86U06 439 aaKnown RBP10.1□□□□□ -0.79
SYNE1-203ENST00000354674 OR7G1Q8NGA0 311 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 TCEAL4Q96EI5 215 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 P2RY11Q96G91 374 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 PAK5Q9P286 719 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 ZMYM5Q9UJ78 669 aa10.1□□□□□ -0.79
SYNE1-203ENST00000354674 LAMA3Q16787 3333 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 NYNRINQ9P2P1 1898 aaKnown RBP10.09□□□□□ -0.79
SYNE1-203ENST00000354674 F5H5T6 163 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 TCF3P15923 654 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 NRIP1P48552 1158 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 NRLP54845 237 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 IFITM2Q01629 132 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 HEATR6Q6AI08 1181 aaKnown RBP10.09□□□□□ -0.79
SYNE1-203ENST00000354674 PCGF5Q86SE9 256 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CHSY1Q86X52 802 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 PQLC1Q8N2U9 271 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 MARVELD2Q8N4S9 558 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 NETO2Q8NC67 525 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 TBC1D15Q8TC07 691 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 EME1Q96AY2 570 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 BBS2Q9BXC9 721 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 SLC39A8Q9C0K1 460 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 C20orf27Q9GZN8 174 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 TASP1Q9H6P5 420 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 LGALS13Q9UHV8 139 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CDH22Q9UJ99 828 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 SMG5Q9UPR3 1016 aaKnown RBP10.09□□□□□ -0.79
SYNE1-203ENST00000354674 H3BNX3 289 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 STX16-NPEPL1H3BU86 382 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CAPN1P07384 714 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CCNCP24863 283 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 BST1Q10588 318 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 MORF4L2Q15014 288 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CHI3L2Q15782 390 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 ZNF829Q3KNS6 432 aaPredicted RBP10.09□□□□□ -0.79
SYNE1-203ENST00000354674 DNAL1Q4LDG9 190 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CHST9Q7L1S5 443 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 PIWIL3Q7Z3Z3 882 aaKnown RBP10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CMTM8Q8IZV2 173 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CCDC33Q8N5R6 958 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 NAT8LQ8N9F0 302 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 ZNF398Q8TD17 642 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 CPT1BQ92523 772 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 MRPL46Q9H2W6 279 aaKnown RBP10.09□□□□□ -0.79
SYNE1-203ENST00000354674 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 ERVK-11Q9UQG0 969 aa10.09□□□□□ -0.79
SYNE1-203ENST00000354674 RNF11Q9Y3C5 154 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms