RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MAPK9P45984 424 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 AGERQ15109 404 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 RAB6CQ53S08 254 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TRNP1Q6NT89 227 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TRIM65Q6PJ69 517 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 ZSWIM9Q86XI8 627 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 XYLT1Q86Y38 959 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 DNAAF5Q86Y56 855 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 EMC1Q8N766 993 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 CEP112Q8N8E3 955 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TMEM35BQ8NCS4 154 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 SLC38A3Q99624 504 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 MAGEB5Q9BZ81 275 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 RAB6CQ9H0N0 254 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TRIT1Q9H3H1 467 aaKnown RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 VIPAS39Q9H9C1 493 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 GOLGA6AQ9NYA3 693 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 APEX2Q9UBZ4 518 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TLK1Q9UKI8 766 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 BICDL2A1A5D9 508 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 TSPAN11A1L157 253 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 LRIG2O94898 1065 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 GNA14O95837 355 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 FESP07332 822 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 MYCLP1P12525 358 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 TNFRSF8P28908 595 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 ACTR1BP42025 376 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 STAT5AP42229 794 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 ACTR1AP61163 376 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 CTBSQ01459 385 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 MC2RQ01718 297 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 RAPGEF1Q13905 1077 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 CYTH1Q15438 398 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 MANEALQ5VSG8 457 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 DENND2CQ68D51 928 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 TTI2Q6NXR4 508 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 PNCKQ6P2M8 343 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 BRAT1Q6PJG6 821 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 DOK6Q6PKX4 331 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 MAMDC2Q7Z304 686 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 TMEM135Q86UB9 458 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 C17orf82Q86X59 251 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 NAGSQ8N159 534 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 PELI3Q8N2H9 469 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 ESX1Q8N693 406 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 BMPERQ8N8U9 685 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 OR10G6Q8NH81 332 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 ZFAND2BQ8WV99 257 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 SHC3Q92529 594 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 N4BP2L2Q92802 583 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 OSBPL9Q96SU4 736 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 ZPBPQ9BS86 351 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 IQCGQ9H095 443 aaKnown RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 PHPT1Q9NRX4 125 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 CUEDC1Q9NWM3 386 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 UBA2Q9UBT2 640 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 POLHQ9Y253 713 aa11.17□□□□□ -0.62
RTN3-204ENST00000354497 OAS3Q9Y6K5 1087 aaKnown RBP11.17□□□□□ -0.62
RTN3-204ENST00000354497 ICE1Q9Y2F5 2266 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 CREBBPQ92793 2442 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 RASA4BC9J798 803 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 POLR1CO15160 346 aaPredicted RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 INPP4BO15327 924 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 RASA4O43374 803 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 BUB1BO60566 1050 aaPredicted RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 KRT38O76015 456 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 DDAH2O95865 285 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 PDGFAP04085 211 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 PLEKP08567 350 aaPredicted RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 HOXC4P09017 264 aaPredicted RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 BMP6P22004 513 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 SERPINA4P29622 427 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 ADRA1BP35368 520 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 SCNN1AP37088 669 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 POLD2P49005 469 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 ETF1P62495 437 aaKnown RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 GPLD1P80108 840 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 RALGDSQ12967 914 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 PEX6Q13608 980 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 GRM3Q14832 879 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 EIF2S3LQ2VIR3 472 aaKnown RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 INO80DQ53TQ3 878 aaPredicted RBP11.16□□□□□ -0.62
RTN3-204ENST00000354497 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 LIPIQ6XZB0 460 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 HDXQ7Z353 690 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 CCDC170Q8IYT3 715 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 MSANTD4Q8NCY6 345 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 NCSTNQ92542 709 aa11.16□□□□□ -0.62
RTN3-204ENST00000354497 NUS1Q96E22 293 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms