RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 GLOD4Q9HC38 313 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 NSMCE4AQ9NXX6 385 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 FTSJ1Q9UET6 329 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 GRID1Q9ULK0 1009 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 VANGL2Q9ULK5 521 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 SOX13Q9UN79 622 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CHD5Q8TDI0 1954 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 MYO18AQ92614 2054 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 ZCWPW2A0A1B0GU75 182 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 HMX2A2RU54 273 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 H0Y8X5 98 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 DFFAO00273 331 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 COPEO14579 308 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 BCAT2O15382 392 aaPredicted RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 KAT7O95251 611 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 JCHAINP01591 159 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 FAM87AP0C7U9 286 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 PYGBP11216 843 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 ADRA1DP25100 572 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 CRHR1P34998 444 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 MAGEA12P43365 314 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 MAPKAPK2P49137 400 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 TUFMP49411 452 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 CSNK1EP49674 416 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 CSE1LP55060 971 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 YBEYP58557 167 aaPredicted RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 PPARDQ03181 441 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 ACTN3Q08043 901 aaPredicted RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 CCDC15Q0P6D6 951 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 EFEMP1Q12805 493 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 TAF10Q12962 218 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SUZ12Q15022 739 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 SLC14A2Q15849 920 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SEPT7Q16181 437 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 MGAT5BQ3V5L5 792 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SPDYAQ5MJ70 313 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SDHAF4Q5VUM1 108 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 CASC4Q6P4E1 433 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 LAYNQ6UX15 382 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 PACS1Q6VY07 963 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 TRPM8Q7Z2W7 1104 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 C14orf80Q86SX3 495 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 CACTIN-AS1Q8N1I8 211 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 TEX26Q8N6G2 289 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 CNTD1Q8N815 330 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 STKLD1Q8NE28 680 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 OR52K1Q8NGK4 314 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 ZNF75CPQ92670 426 aaPredicted RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 MRRFQ96E11 262 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 CERS2Q96G23 380 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 POM121Q96HA1 1249 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SRPK1Q96SB4 655 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 CYP2S1Q96SQ9 504 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SEPT5Q99719 369 aaPredicted RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 CPNE1Q99829 537 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 KIFC1Q9BW19 673 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 PITPNM3Q9BZ71 974 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 MIR1-1HGQ9H1L0 117 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 NOL6Q9H6R4 1146 aaKnown RBP8.25□□□□□ -1.09
CD44-205ENST00000352818 MLXIPLQ9NP71 852 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 ASCL3Q9NQ33 180 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 HAUS2Q9NVX0 235 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 MARCH2Q9P0N8 246 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 ZNF212Q9UDV6 495 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 SLC12A4Q9UP95 1085 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 PLLPQ9Y342 182 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 MYLKQ15746 1914 aa8.25□□□□□ -1.09
CD44-205ENST00000352818 BIRC5O15392 142 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ZNF217O75362 1048 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 PIAS1O75925 651 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 TGDSO95455 350 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 MOCS2O96007 188 aaPredicted RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 PEX11BO96011 259 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 CYP17A1P05093 508 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 MPOP05164 745 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 C1SP09871 688 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 GLDCP23378 1020 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ADRA1AP35348 466 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 GP5P40197 560 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 HADHAP40939 763 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 WASP42768 502 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 PAPOLAP51003 745 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 RENBPP51606 427 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 INSM1Q01101 510 aaPredicted RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 CDK18Q07002 472 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 MPP3Q13368 585 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ZKSCAN8Q15776 578 aaPredicted RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 INSCQ1MX18 579 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 PARP15Q460N3 678 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ANKRD20A4Q4UJ75 823 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 GRTP1Q5TC63 336 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 PDPK2PQ6A1A2 396 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 KYAT3Q6YP21 454 aaKnown RBP8.24□□□□□ -1.09
CD44-205ENST00000352818 ARHGAP36Q6ZRI8 547 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 ITIH5Q86UX2 942 aa8.24□□□□□ -1.09
CD44-205ENST00000352818 EXTL1Q92935 676 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms