RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 OR4L1Q8NH43 312 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 MRRFQ96E11 262 aaKnown RBP18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 ZIM3Q96PE6 472 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM83DQ9H4H8 585 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 C6orf106Q9H6K1 298 aaPredicted RBP18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 NFKBIL1Q9UBC1 381 aaPredicted RBP18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 MBD1Q9UIS9 605 aaPredicted RBP18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 PSAT1Q9Y617 370 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 GLYATL1P3A0A0U1RQE8 302 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 RGSL1A5PLK6 1076 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 K7ESM1 405 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 AXIN1O15169 862 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 CD3EAPO15446 510 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM155BO75949 473 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 SASH3O75995 380 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 TM7SF2O76062 418 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 SRP72O76094 671 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 PRAMEF1O95521 474 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 CD6P30203 668 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 DCDC1P59894 354 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 RPS21P63220 83 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 MPP1Q00013 466 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 CTBP1Q13363 440 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 ZRANB3Q5FWF4 1079 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 HENMT1Q5T8I9 393 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 KIAA1161Q6NSJ0 714 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 BMP8AQ7Z5Y6 402 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 NRSN1Q8IZ57 195 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 FBXL6Q8N531 539 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 PPM1NQ8N819 430 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 DTWD2Q8NBA8 298 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 NUS1Q96E22 293 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 CCDC97Q96F63 343 aaPredicted RBP18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 PLEKHG4BQ96PX9 1271 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 C1QTNF2Q9BXJ5 285 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 KDM4CQ9H3R0 1056 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 CATSPERZQ9NTU4 200 aa18.91■□□□□ 0.62
CHMP4A-201ENST00000347519 KMT2EQ8IZD2 1858 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 CEP192Q8TEP8 1941 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 FADS2P1A8MWK0 482 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 POC1B-GALNT4F8VUJ3 575 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 RAD51BO15315 384 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 ZNF217O75362 1048 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 PAK4O96013 591 aaPredicted RBP18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 SOD1P00441 154 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 GABRB3P28472 473 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 OXTRP30559 389 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 SLC1A2P43004 574 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 FNTBP49356 437 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 PTPN5P54829 565 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 THOC5Q13769 683 aaKnown RBP18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 WSCD2Q2TBF2 565 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 ATP13A5Q4VNC0 1218 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 ZNF789Q5FWF6 425 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 ZNF470Q6ECI4 717 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 NEK5Q6P3R8 708 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 C1orf210Q8IVY1 113 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 CNTN4Q8IWV2 1026 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 TP53I13Q8NBR0 393 aaPredicted RBP18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 PLA2G15Q8NCC3 412 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 ZNF398Q8TD17 642 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 AP2M1Q96CW1 435 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 SGSM3Q96HU1 749 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 CYTH2Q99418 400 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 GPR174Q9BXC1 333 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 SLC17A9Q9BYT1 436 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 ASB8Q9H765 288 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 EBF2Q9HAK2 575 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 FZD3Q9NPG1 666 aa18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 MBNL1Q9NR56 388 aaKnown RBP18.9■□□□□ 0.62
CHMP4A-201ENST00000347519 LRRC72A6NJI9 287 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 LAMTOR5O43504 91 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 HOXA6P31267 233 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 ABCG1P45844 678 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 CACNG1Q06432 222 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 AGERQ15109 404 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 MARK2Q7KZI7 788 aaKnown RBP18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 ZNF765Q7L2R6 523 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 HDXQ7Z353 690 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 TRIM69Q86WT6 500 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 CTAGE3PQ8IX95 158 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 RAVER1Q8IY67 606 aaKnown RBP18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 GPR150Q8NGU9 434 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 EPS8L3Q8TE67 593 aaKnown RBP18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 SPATA16Q9BXB7 569 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 VPS18Q9P253 973 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 APPL1Q9UKG1 709 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 SLC30A1Q9Y6M5 507 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 ZDBF2Q9HCK1 2354 aa18.89■□□□□ 0.61
CHMP4A-201ENST00000347519 TRBV5-4A0A0C4DH59 114 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 EXOC1LA0A1B0GW35 172 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 SLC31A1O15431 190 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 IGHV4-34P06331 123 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 BCKDHBP21953 392 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 PLA2G5P39877 138 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 CSTF1Q05048 431 aaKnown RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 ZNF844Q08AG5 666 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 NFATC2Q13469 925 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 STAT4Q14765 748 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 IRF4Q15306 451 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms