RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CEACAM5P06731 702 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 PIRTP0C851 137 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 CD68P34810 354 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 ACTN2P35609 894 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 RPS6KA1Q15418 735 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 ZNF569Q5MCW4 686 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 ANKRD20A2Q5SQ80 823 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 ANKRD20A1Q5TYW2 823 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 ANKRD20A3Q5VUR7 823 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 PDPK2PQ6A1A2 396 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 GUSBP11Q6P575 273 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 ARHGEF18Q6ZSZ5 1173 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 TMC3Q7Z5M5 1100 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC35F3Q8IY50 421 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 PELI3Q8N2H9 469 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC25A41Q8N5S1 370 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 NXPE2Q96DL1 559 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 OR2M4Q96R27 311 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 FRMD8P1Q9BZ68 369 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 SYNDIG1Q9H7V2 258 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 GRPEL1Q9HAV7 217 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 LZTFL1Q9NQ48 299 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 VPS18Q9P253 973 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 PNMA8BQ9ULN7 279 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 SUFUQ9UMX1 484 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC17A4Q9Y2C5 497 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 PKP3Q9Y446 797 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 KNTC1P50748 2209 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 LOC285095A0A1B0GVY8 99 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 B4DGG1 531 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 F5H423 210 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 DDX3YO15523 660 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC25A14O95258 325 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 DCDC1P59894 354 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 INSM1Q01101 510 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 TARDBPQ13148 414 aaKnown RBP eCLIP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 LRP8Q14114 963 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 HENMT1Q5T8I9 393 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 ALS2CLQ60I27 953 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 KDELC1Q6UW63 502 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 RFLNAQ6ZTI6 216 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 MARK2Q7KZI7 788 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 GLT6D1Q7Z4J2 308 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 TRIM58Q8NG06 486 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 BLOC1S5Q8TDH9 187 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 GPBAR1Q8TDU6 330 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 GRAMD1AQ96CP6 724 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 SPATA13Q96N96 652 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 CAAP1Q9H8G2 361 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 RMI1Q9H9A7 625 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 ZNHIT2Q9UHR6 403 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 AK5Q9Y6K8 562 aa15.67■□□□□ 0.1
TSPAN4-201ENST00000346501 TRABD2BA6NFA1 517 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 C2orf81A6NN90 581 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 PPFIA2O75334 1257 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 TCEA3O75764 348 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 CELA2BP08218 269 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 MYF5P13349 255 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 SPIDRQ14159 915 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC1A5Q15758 541 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 P3H1Q32P28 736 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 SIRPB2Q5JXA9 342 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 AADACL2Q6P093 401 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 ZNF662Q6ZS27 426 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 PHYKPLQ8IUZ5 450 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 TRAM1L1Q8N609 369 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 KDF1Q8NAX2 398 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 MAIP1Q8WWC4 291 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 TTC25Q96NG3 672 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 PLEKHG4BQ96PX9 1271 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 FAM118BQ9BPY3 351 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 C10orf88Q9H8K7 445 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 NFKBIL1Q9UBC1 381 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 TMEM98Q9Y2Y6 226 aa15.66■□□□□ 0.1
TSPAN4-201ENST00000346501 LY6G6EA0A0G2JKS1 128 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 A0A0U1RQJ8 604 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 C5orf60A6NFR6 353 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 GPR89AB7ZAQ6 455 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 PSMD3O43242 534 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 SOD1P00441 154 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 GPR89BP0CG08 455 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC2A4P14672 509 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 GLB1P16278 677 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 STIP1P31948 543 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 HMGCLP35914 325 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 ADCY8P40145 1251 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 ACTR1BP42025 376 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 POLD2P49005 469 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 ACTR1AP61163 376 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 PDE1BQ01064 536 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 C14orf28Q4W4Y0 310 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 OGFOD3Q6PK18 319 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC30A9Q6PML9 568 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 RBM44Q6ZP01 1051 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 TRIM74Q86UV6 250 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 DCBLD1Q8N8Z6 715 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 KYQ8NBH2 561 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 GDAP1Q8TB36 358 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 ZDHHC1Q8WTX9 485 aa15.65■□□□□ 0.1
TSPAN4-201ENST00000346501 OXNAD1Q96HP4 312 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms