RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 INPP4BO15327 924 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 NOBOXO60393 691 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 MFAP3LO75121 409 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 TRBC1P01850 177 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 KRT1P04264 644 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 HLA-DQB2P05538 268 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 CEACAM5P06731 702 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 AK4P27144 223 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 MAN1A1P33908 653 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 CD86P42081 329 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 MAZP56270 477 aaKnown RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 PTSQ03393 145 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 NIPAL4Q0D2K0 466 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 SLC10A2Q12908 348 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 ASTE1Q2TB18 679 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 AMZ1Q400G9 498 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 KDELC2Q7Z4H8 507 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 ZNF438Q7Z4V0 828 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 TECPR1Q7Z6L1 1165 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 B3GNT8Q7Z7M8 397 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 DTX1Q86Y01 620 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 RFX6Q8HWS3 928 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 SLITRK4Q8IW52 837 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 RHOT2Q8IXI1 618 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 CBARPQ8N350 705 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 MCCC1Q96RQ3 725 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 PCDH9Q9HC56 1237 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 SPATS2LQ9NUQ6 558 aaKnown RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 DTLQ9NZJ0 730 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 TAAR2Q9P1P5 351 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 AMACRQ9UHK6 382 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 PPIL1Q9Y3C6 166 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 PCDHGA3Q9Y5H0 932 aa12.36□□□□□ -0.43
SGCA-202ENST00000344627 COL27A1Q8IZC6 1860 aaPredicted RBP12.36□□□□□ -0.43
SGCA-202ENST00000344627 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 APOL1O14791 398 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 CAPN5O15484 640 aaPredicted RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 EFSO43281 561 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 FZD6O60353 706 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 WISP1O95388 367 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 CLDN7O95471 211 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ZNF30P17039 623 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ALDH4A1P30038 563 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ADCY8P40145 1251 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 CSRP3P50461 194 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 DYNLT1P63172 113 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 B4GALNT1Q00973 533 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 DPTQ07507 201 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 LY6DQ14210 128 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 FAM182AQ5T1J6 154 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 PHF19Q5T6S3 580 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 FATE1Q969F0 183 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 FAF2Q96CS3 445 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 HDAC11Q96DB2 347 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 AGAP3Q96P47 875 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 RIOK2Q9BVS4 552 aaKnown RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 TDRD1Q9BXT4 1180 aaKnown RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 CEP41Q9BYV8 373 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 CDH19Q9H159 772 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ADNPQ9H2P0 1102 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 PISDQ9UG56 409 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ZNHIT2Q9UHR6 403 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 ZFC3H1O60293 1989 aaKnown RBP12.35□□□□□ -0.43
SGCA-202ENST00000344627 MGAQ8IWI9 3026 aa12.35□□□□□ -0.43
SGCA-202ENST00000344627 TRBV23OR9-2A0A075B6M9 112 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 AKR1B15C9JRZ8 316 aaPredicted RBP12.34□□□□□ -0.43
SGCA-202ENST00000344627 PPP1R12AO14974 1030 aaPredicted RBP12.34□□□□□ -0.43
SGCA-202ENST00000344627 SPOPO43791 374 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 SLC28A2O43868 658 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ECEL1O95672 775 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 SLC4A1P02730 911 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 FUCA1P04066 466 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 FGF1P05230 155 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 IVLP07476 585 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 HGFP14210 728 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ZFXP17010 805 aaPredicted RBP12.34□□□□□ -0.43
SGCA-202ENST00000344627 ACTR1BP42025 376 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 STC1P52823 247 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 OR1D5P58170 312 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 RAB15P59190 212 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ACTR1AP61163 376 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 GPLD1P80108 840 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 CTBSQ01459 385 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 GALNT3Q14435 633 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 IHHQ14623 411 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 PDK1Q15118 436 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 KIAA1614Q5VZ46 1190 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms