RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 ZNF549Q6P9A3 640 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 DSG4Q86SJ6 1040 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 CEP97Q8IW35 865 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 HHIPQ96QV1 700 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 SELENOSQ9BQE4 189 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 ASB8Q9H765 288 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 PLXNA2O75051 1894 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 UBA6A0AVT1 1052 aaPredicted RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 IQCF5A8MTL0 148 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 DCNP07585 359 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 C6P13671 934 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 FASTKD1Q53R41 847 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 ZNF776Q68DI1 518 aaPredicted RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 ERAP2Q6P179 960 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 AFTPHQ6ULP2 937 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 CLDN19Q8N6F1 224 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 MGARPQ8TDB4 240 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 PPP1R16AQ96I34 528 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 ASB2Q96Q27 587 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 OLFM1Q99784 485 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 RIOK2Q9BVS4 552 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 SLC13A1Q9BZW2 595 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 LTB4R2Q9NPC1 389 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 ZNF358Q9NW07 568 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 FETUBQ9UGM5 382 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 FADS3Q9Y5Q0 445 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 TECTAO75443 2155 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 FADS2P1A8MWK0 482 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 GABRG2P18507 467 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 MAT2AP31153 395 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 LIMK2P53671 638 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 MRPS21P82921 87 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 GPS2Q13227 327 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 NFATC2Q13469 925 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 AGBL2Q5U5Z8 902 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 NAPRTQ6XQN6 538 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 TRIM74Q86UV6 250 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 KRT222Q8N1A0 295 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 OMDQ99983 421 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 FAM167BQ9BTA0 163 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 TBC1D17Q9HA65 648 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 GALPQ9UBC7 116 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 ANKRD12Q6UB98 2062 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 RNASEH1O60930 286 aaKnown RBP13.81□□□□□ -0.2
PMS1-201ENST00000342075 PCDH8O95206 1070 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 PMLP29590 882 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 SPAM1P38567 509 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 CDKN2DP55273 166 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 LRRC14Q15048 493 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 KHDC1Q4VXA5 237 aaKnown RBP13.81□□□□□ -0.2
PMS1-201ENST00000342075 GJD3Q8N144 294 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 NDUFAF2Q8N183 169 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 ANKRD42Q8N9B4 389 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 MYOCQ99972 504 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 SPATA16Q9BXB7 569 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 ZNF180Q9UJW8 692 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 KANSL1LA0AUZ9 987 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 IGLON5A6NGN9 336 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 HMGB1P1B2RPK0 211 aaPredicted RBP13.81□□□□□ -0.2
PMS1-201ENST00000342075 SNRPAP09012 282 aaKnown RBP13.81□□□□□ -0.2
PMS1-201ENST00000342075 CYP2A6P11509 494 aaPredicted RBP13.81□□□□□ -0.2
PMS1-201ENST00000342075 BRAFP15056 766 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 NR1D1P20393 614 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 FMO4P31512 558 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 HADHAP40939 763 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 PDE1BQ01064 536 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 SH2D5Q6ZV89 423 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 OR14C36Q8NHC7 312 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 SIPA1Q96FS4 1042 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 ELMO2Q96JJ3 720 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 KCNK9Q9NPC2 374 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 PRSS21Q9Y6M0 314 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 SLC30A1Q9Y6M5 507 aa13.81□□□□□ -0.2
PMS1-201ENST00000342075 IQANK1A0A1B0GTG1 560 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 FAM95CA0A1B0GW59 222 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 INPP4BO15327 924 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 RECQL5O94762 991 aaPredicted RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 DNTTP04053 509 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PSMA3P25788 255 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 ACSL1P33121 698 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 LEPRP48357 1165 aaKnown RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 CD151P48509 253 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 DBN1Q16643 649 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 SERPINA9Q86WD7 417 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 FAM160A2Q8N612 972 aaPredicted RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 PLA2G15Q8NCC3 412 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PEX13Q92968 403 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 HDAC8Q9BY41 377 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 TPSD1Q9BZJ3 242 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 SNX15Q9NRS6 342 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 WNT16Q9UBV4 365 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 EBF1Q9UH73 591 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 TSR3Q9UJK0 312 aaKnown RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 RIMKLBQ9ULI2 386 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 H7C0S8 307 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms