RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 SH3PXD2BA1X283 911 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 E9PAM4 449 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 FXYD1O00168 92 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 THP07101 528 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CCNCP24863 283 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CDKN1CP49918 316 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 FPGSQ05932 587 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 SEMA3AQ14563 771 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 DDR2Q16832 855 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 MARC1Q5VT66 337 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 NANOGP8Q6NSW7 305 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 BORAQ6PGQ7 559 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 RANBP10Q6VN20 620 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 MILR1Q7Z6M3 343 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 RNF168Q8IYW5 571 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 ANKFN1Q8N957 763 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CENPNQ96H22 339 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CCDC138Q96M89 665 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CHID1Q9BWS9 393 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 TRIM15Q9C019 465 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 SMPD3Q9NY59 655 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 GALPQ9UBC7 116 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 NPEPPSL1A6NEC2 478 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 GNGT2O14610 69 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 LDLRP01130 860 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 ITGB6P18564 788 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 BMXP51813 675 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 ACAP2Q15057 778 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 PSMD5Q16401 504 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CYP2A13Q16696 494 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 C18orf21Q32NC0 220 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 EGFLAMQ63HQ2 1017 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 KIAA0930Q6ICG6 404 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 PAQR3Q6TCH7 311 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CFAP52Q8N1V2 620 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 GABPB2Q8TAK5 448 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-202ENST00000339570 HIPK3Q9H422 1215 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 AGPAT4Q9NRZ5 378 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 SLC38A7Q9NVC3 462 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 ANAPC2Q9UJX6 822 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 UTS2RQ9UKP6 389 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 COQ6Q9Y2Z9 468 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 SH3GLB1Q9Y371 365 aa16.07■□□□□ 0.16
SCARB1-202ENST00000339570 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 BTN3A1O00481 513 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 ITGB1P05556 798 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SLC2A3P11169 496 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 BMP2P12643 396 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 LBPP18428 481 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 USP41Q3LFD5 358 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CENPSQ8N2Z9 138 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 LZTR1Q8N653 840 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 PAF1Q8N7H5 531 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 HM13Q8TCT9 377 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 TSPAN17Q96FV3 270 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 FAM210AQ96ND0 272 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 A0A1W2PQH9 124 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SYNCRIPO60506 623 aaKnown RBP16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SHMT2P34897 504 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 GJA5P36382 358 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CLCN5P51795 746 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 HK2P52789 917 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 DNAJB13P59910 316 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 HERVK_113P63132 956 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SCAPQ12770 1279 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 MFSD10Q14728 455 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SIRPB2Q5JXA9 342 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 FAM45BPQ6NSW5 357 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 ZNF549Q6P9A3 640 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SLC22A9Q8IVM8 553 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 FBXO39Q8N4B4 442 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 FAM45AQ8TCE6 357 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SEPT8Q92599 483 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CCDC126Q96EE4 140 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SEMA3CQ99985 751 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 ERVK-6Q9BXR3 956 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 GID8Q9NWU2 228 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 IKZF3Q9UKT9 509 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CNOT11Q9UKZ1 510 aaKnown RBP16.06■□□□□ 0.16
SCARB1-202ENST00000339570 HS3ST4Q9Y661 456 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CCDC162PA2VCL2 907 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 PDHXO00330 501 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 BMP10O95393 424 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 S1PR4O95977 384 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 FUCA1P04066 466 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SELPLGQ14242 412 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-202ENST00000339570 BHLHA9Q7RTU4 235 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 TBC1D15Q8TC07 691 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SDCCAG3Q96C92 435 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 RMDN1Q96DB5 314 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SLC30A3Q99726 388 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 SPON2Q9BUD6 331 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CATSPERBQ9H7T0 1116 aa16.06■□□□□ 0.16
SCARB1-202ENST00000339570 CIDEBQ9UHD4 219 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms