RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ADARB1P78563 741 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 POU5F1BQ06416 359 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 FLYWCH1Q4VC44 716 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 REP15Q6BDI9 236 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 USP51Q70EK9 711 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 VN1R5Q7Z5H4 357 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CCDC36Q8IYA8 594 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF444Q8N0Y2 327 aaPredicted RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 LPPQ93052 612 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 PHF21AQ96BD5 680 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 TMEM47Q9BQJ4 181 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 PDGFDQ9GZP0 370 aaPredicted RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 DHX33Q9H6R0 707 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF556Q9HAH1 456 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 POPDC2Q9HBU9 364 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CYP3A7-CYP3A51PA0A087WV96 503 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CCDC154A6NI56 674 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ARHGEF9O43307 516 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 SSX5O60225 188 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 FAM13AO94988 1023 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 NPPAP01160 153 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 HOXB3P14651 431 aaPredicted RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ADRA2BP18089 450 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CYP3A5P20815 502 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CYP3A7P24462 503 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CSTF2P33240 577 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■■□ 19.4
PTCHD4-201ENST00000339488 EMX1Q04741 257 aaPredicted RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CAPRIN1Q14444 709 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 UGP2Q16851 508 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 LEXMQ3ZCV2 418 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 FAM26DQ5JW98 314 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 LGSNQ5TDP6 509 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 SMYD5Q6GMV2 418 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 UNC5DQ6UXZ4 953 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 RBM23Q86U06 439 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 COLGALT2Q8IYK4 626 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 HS3ST5Q8IZT8 346 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 PTERQ96BW5 349 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 B3GALT6Q96L58 329 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 FEM1AQ9BSK4 669 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CD320Q9NPF0 282 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 RAB6BQ9NRW1 208 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CACNA2D2Q9NY47 1150 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.874e-6■□□□□ 10.4
PTCHD4-201ENST00000339488 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CDY2AQ9Y6F7 541 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CDY1Q9Y6F8 540 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 GJA3Q9Y6H8 435 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 LAMB1P07942 1786 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ANKRD12Q6UB98 2062 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SIPA1L3O60292 1781 aaPredicted RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SCN11AQ9UI33 1791 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PRSS44E7EML9 344 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 BET1O15155 118 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 INPP4BO15327 924 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 NCAM2O15394 837 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PGLSO95336 258 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CCNE2O96020 404 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PIGAP37287 484 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CSKP41240 450 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 MAGEA11P43364 429 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CCT3P49368 545 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 IRF9Q00978 393 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 NFIAQ12857 509 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 DPYSL3Q14195 570 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SYT16Q17RD7 645 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 METTL11BQ5VVY1 283 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SEL1L3Q68CR1 1132 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 GLYATQ6IB77 296 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CES3Q6UWW8 571 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 RAB43Q86YS6 212 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 TIGD4Q8IY51 512 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SLC35B2Q8TB61 432 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CNIH3Q8TBE1 160 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PNPT1Q8TCS8 783 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SHC3Q92529 594 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CBWD1Q9BRT8 395 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 HTATIP2Q9BUP3 242 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 DCSTAMPQ9H295 470 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 ELOVL6Q9H5J4 265 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 NGRNQ9NPE2 291 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 TRMT6Q9UJA5 497 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PDE10AQ9Y233 779 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PCDHB12Q9Y5F1 795 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PCDHGB6Q9Y5F9 930 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CSADQ9Y600 493 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 ROBO3Q96MS0 1386 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 A0A0B4J293 547 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CCDC78A2IDD5 438 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PABPN1LA6NDY0 278 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 TEX46H3BTG2 121 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 NOBOXO60393 691 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 LRIG2O94898 1065 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CHRM3P20309 590 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 NSFP46459 744 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 GYG1P46976 350 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PCDH1Q08174 1060 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms