RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 HTRA1Q92743 480 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SH3KBP1Q96B97 665 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CFAP36Q96G28 342 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 FAM84AQ96KN4 292 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 PSKH2Q96QS6 385 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SDHCQ99643 169 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 C11orf70Q9BRQ4 267 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ZBED2Q9BTP6 218 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 HMX1Q9NP08 348 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 MRGBPQ9NV56 204 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 NDFIP2Q9NV92 336 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ADPRHL2Q9NX46 363 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CACNA2D2Q9NY47 1150 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 OSGIN1Q9UJX0 560 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 USTQ9Y2C2 406 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 FAM149AA5PLN7 773 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 UPK1AO00322 258 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SLC9A3R1O14745 358 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CFLARO15519 480 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ASNA1O43681 348 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ENDOD1O94919 500 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ARSAP15289 507 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CYP2B6P20813 491 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 IGFBP6P24592 240 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CCND2P30279 289 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 GGT5P36269 586 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 LTBRP36941 435 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 HK2P52789 917 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 LIMK1P53667 647 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 TAGLNQ01995 201 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 VAC14Q08AM6 782 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 INCA1Q0VD86 236 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 AASDHQ4L235 1098 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 TJAP1Q5JTD0 557 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CRTC3Q6UUV7 619 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 MAMSTRQ6ZN01 415 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SPATC1Q76KD6 591 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ENOSF1Q7L5Y1 443 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SLCO6A1Q86UG4 719 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CBWD2Q8IUF1 395 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 KIAA2013Q8IYS2 634 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 PQLC3Q8N755 202 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 JPH3Q8WXH2 748 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 BSNDQ8WZ55 320 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 RMDN1Q96DB5 314 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 YIPF6Q96EC8 236 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 MSLNLQ96KJ4 702 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 FRMD8P1Q9BZ68 369 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SMOC2Q9H3U7 446 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SLA2Q9H6Q3 261 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 RAB20Q9NX57 234 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SEPT9Q9UHD8 586 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 OAZ3Q9UMX2 235 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 AP4E1Q9UPM8 1137 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 TCRBV5S2A0A599 114 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SAC3D1A6NKF1 404 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 OR5K4A6NMS3 321 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 KCNU1A8MYU2 1149 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 TAF4O00268 1085 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 EXTL3O43909 919 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF623O75123 536 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 GLRA3O75311 464 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 IL4RP24394 825 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 GRIK1P39086 918 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 WNT7BP56706 349 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 PSME3P61289 254 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 C1QBPQ07021 282 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 DSC1Q08554 894 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 ILF2Q12905 390 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SEMA5AQ13591 1074 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 PLCL1Q15111 1095 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 FSCN1Q16658 493 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 NEK5Q6P3R8 708 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CYP20A1Q6UW02 462 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 UBQLNLQ8IYU4 475 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 CLYBLQ8N0X4 340 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 FAM109AQ8N4B1 249 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 WDTC1Q8N5D0 677 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SLC45A3Q96JT2 553 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 MUS81Q96NY9 551 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 DEFB118Q96PH6 123 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM246Q9BRR3 403 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 PI4K2AQ9BTU6 479 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 MKRN2Q9H000 416 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 AGO3Q9H9G7 860 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 C12orf4Q9NQ89 552 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 IP6K2Q9UHH9 426 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 AGO1Q9UL18 857 aaKnown RBP5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SATB2Q9UPW6 733 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 POLHQ9Y253 713 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 RWDD3Q9Y3V2 267 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 SPEF1Q9Y4P9 236 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 PCDHGB1Q9Y5G3 927 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 AKAP9Q99996 3911 aa5.58□□□□□ -1.52
CSDE1-202ENST00000339438 NBEAQ8NFP9 2946 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SYCE1LA8MT33 242 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 A8MX80 341 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MEN1O00255 615 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms