RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 FRYLO94915 3013 aa22.06■■□□□ 1.12
SDC3-202ENST00000339394 DNAH14Q0VDD8 3507 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 USP1O94782 785 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 POLBP06746 335 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 GPR1P46091 355 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 CHRNA6Q15825 494 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 MICALCLQ6ZW33 695 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 CCNJLQ8IV13 435 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 TRAM1L1Q8N609 369 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 EIF1ADQ8N9N8 165 aaKnown RBP22.05■■□□□ 1.12
SDC3-202ENST00000339394 RUBCNQ92622 972 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 TM9SF3Q9HD45 589 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 AASDHPPTQ9NRN7 309 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 ZC3H7BQ9UGR2 993 aaKnown RBP22.05■■□□□ 1.12
SDC3-202ENST00000339394 PILRBQ9UKJ0 227 aa22.05■■□□□ 1.12
SDC3-202ENST00000339394 ATXN2Q99700 1313 aaKnown RBP22.05■■□□□ 1.12
SDC3-202ENST00000339394 ZCWPW2A0A1B0GU75 182 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 FADS2P1A8MWK0 482 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 GPR39O43194 453 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 SRP72O76094 671 aaKnown RBP22.04■■□□□ 1.12
SDC3-202ENST00000339394 PRAMEF1O95521 474 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 TSHRP16473 764 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 TNFRSF8P28908 595 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 MC4RP32245 332 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 TRIM23P36406 574 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 NAA30Q147X3 362 aaPredicted RBP22.04■■□□□ 1.12
SDC3-202ENST00000339394 ATP13A5Q4VNC0 1218 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 PYROXD1Q8WU10 500 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 ZNF669Q96BR6 464 aaPredicted RBP22.04■■□□□ 1.12
SDC3-202ENST00000339394 TSPYL1Q9H0U9 437 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 PLAC1Q9HBJ0 212 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 RAB23Q9ULC3 237 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 OR1A2Q9Y585 309 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 CCDC162PA2VCL2 907 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 OR51F1A6NGY5 319 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 BCAT2O15382 392 aaPredicted RBP22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A9O60656 530 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 TTC4O95801 387 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 MYBL2P10244 700 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A6P19224 532 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A1P22309 533 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A4P22310 534 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 ARNTP27540 789 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A3P35503 534 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A5P35504 534 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 PRAMEP78395 509 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 ABI3BPQ7Z7G0 1075 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 SYT12Q8IV01 421 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 GPR161Q8N6U8 529 aaKnown RBP22.04■■□□□ 1.12
SDC3-202ENST00000339394 OR6P1Q8NGX9 317 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 ZNF398Q8TD17 642 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 PIGKQ92643 395 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A7Q9HAW7 530 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A10Q9HAW8 530 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 UGT1A8Q9HAW9 530 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 FAM86C1Q9NVL1 165 aa22.04■■□□□ 1.12
SDC3-202ENST00000339394 VAPBO95292 243 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 PYGLP06737 847 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 PAMP19021 973 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 TEAD1P28347 426 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 CD38P28907 300 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 MAGEA4P43358 317 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 ARCN1P48444 511 aaKnown RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 PFN3P60673 137 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 VSNL1P62760 191 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 NFATC2Q13469 925 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 CRYMQ14894 314 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 PDPK2PQ6A1A2 396 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 KIAA0930Q6ICG6 404 aaPredicted RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 KYAT3Q6YP21 454 aaKnown RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 CCNI2Q6ZMN8 369 aaPredicted RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 UNC5AQ6ZN44 842 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 GSPT2Q8IYD1 628 aaKnown RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 CFAP36Q96G28 342 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 LOXL4Q96JB6 756 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 SEMA4AQ9H3S1 761 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 ASB8Q9H765 288 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 WDR26Q9H7D7 661 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 CNOT6Q9ULM6 557 aaKnown RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 SMG5Q9UPR3 1016 aaKnown RBP22.03■■□□□ 1.12
SDC3-202ENST00000339394 SLC30A1Q9Y6M5 507 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 FAM169AQ9Y6X4 670 aa22.03■■□□□ 1.12
SDC3-202ENST00000339394 GON4LQ3T8J9 2241 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 SDK1Q7Z5N4 2213 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 A6NNZ2 444 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 GOT2P00505 430 aaKnown RBP22.02■■□□□ 1.12
SDC3-202ENST00000339394 GNSP15586 552 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 AFF3P51826 1226 aaKnown RBP22.02■■□□□ 1.12
SDC3-202ENST00000339394 ITGA9Q13797 1035 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 PEAR1Q5VY43 1037 aaPredicted RBP22.02■■□□□ 1.12
SDC3-202ENST00000339394 WDR93Q6P2C0 686 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 LAYNQ6UX15 382 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 ADAMTSL4Q6UY14 1074 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 Q6ZSR6 202 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 CEP128Q6ZU80 1094 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 SNX20Q7Z614 316 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 HEATR4Q86WZ0 1026 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 MFSD2AQ8NA29 543 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 OR4L1Q8NH43 312 aa22.02■■□□□ 1.12
SDC3-202ENST00000339394 C9orf72Q96LT7 481 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms