RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ABCG8Q9H221 673 aa11.42□□□□□ -0.58
CSMD2-202ENST00000338325 STN1Q9H668 368 aaKnown RBP11.42□□□□□ -0.58
CSMD2-202ENST00000338325 APMAPQ9HDC9 416 aa11.42□□□□□ -0.58
CSMD2-202ENST00000338325 PARVAQ9NVD7 372 aa11.42□□□□□ -0.58
CSMD2-202ENST00000338325 CWC15Q9P013 229 aaKnown RBP11.42□□□□□ -0.58
CSMD2-202ENST00000338325 CD84Q9UIB8 345 aa11.42□□□□□ -0.58
CSMD2-202ENST00000338325 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
CSMD2-202ENST00000338325 SPENQ96T58 3664 aaKnown RBP11.42□□□□□ -0.58
CSMD2-202ENST00000338325 USP9YO00507 2555 aaPredicted RBP11.41□□□□□ -0.58
CSMD2-202ENST00000338325 PRR19A6NJB7 356 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 RNF8O76064 485 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 EML2O95834 649 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 DLGAP3O95886 979 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 PYGLP06737 847 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 CTPS1P17812 591 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 TCN2P20062 427 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 TNFAIP3P21580 790 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 MIPP30301 263 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 STAT5AP42229 794 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 NOP2P46087 812 aaKnown RBP11.41□□□□□ -0.58
CSMD2-202ENST00000338325 COPB1P53618 953 aaKnown RBP11.41□□□□□ -0.58
CSMD2-202ENST00000338325 KLRB1Q12918 225 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 MAP7Q14244 749 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 ARMC12Q5T9G4 340 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 ATP1A1-AS1Q5TC04 95 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 LRRC66Q68CR7 880 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 PPP1R2P3Q6NXS1 205 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 C16orf46Q6P387 395 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 RFLNAQ6ZTI6 216 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 ZNF765Q7L2R6 523 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 ESX1Q8N693 406 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 NCSTNQ92542 709 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 PSMG3-AS1Q96PY0 264 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 ZWILCHQ9H900 591 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 SARS2Q9NP81 518 aaKnown RBP11.41□□□□□ -0.58
CSMD2-202ENST00000338325 TAS2R14Q9NYV8 317 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 TP53TG5Q9Y2B4 290 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 PPIL1Q9Y3C6 166 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 KCTD3Q9Y597 815 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 TEX15Q9BXT5 2789 aa11.41□□□□□ -0.58
CSMD2-202ENST00000338325 UTP20O75691 2785 aaKnown RBP11.41□□□□□ -0.58
CSMD2-202ENST00000338325 A0A0U1RQS6 177 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 BLACEA4D250 179 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 H3BRJ5 948 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 POLR1CO15160 346 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-202ENST00000338325 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-202ENST00000338325 FERP16591 822 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 ZNF30P17039 623 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 MMP13P45452 471 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 CD97P48960 835 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 EPHA4P54764 986 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 MAXP61244 160 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 NFATC2Q13469 925 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 PLEKHA7Q6IQ23 1121 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 NLRP8Q86W28 1048 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 ATCAYQ86WG3 371 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 NDUFAF2Q8N183 169 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 NSMCE1Q8WV22 266 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 PIH1D2Q8WWB5 315 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 SCAMP4Q969E2 229 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 SH3KBP1Q96B97 665 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 COX14Q96I36 57 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 MRPS18BQ9Y676 258 aaKnown RBP11.4□□□□□ -0.58
CSMD2-202ENST00000338325 NBPF19A0A087WUL8 3843 aa11.4□□□□□ -0.58
CSMD2-202ENST00000338325 TMEM191CA6NGB0 347 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 LGALS16A8MUM7 142 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 TMCO5BA8MYB1 307 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 MTSS1O43312 755 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 MAFKO60675 156 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 LRCH4O75427 683 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 ASMTLO95671 621 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 CCDC172P0C7W6 258 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 ATP1A3P13637 1013 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 MAPK9P45984 424 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 TMCO3Q6UWJ1 677 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 AGAP2Q99490 1192 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 HERPUD2Q9BSE4 406 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 EPB41L1Q9H4G0 881 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 SIDT1Q9NXL6 827 aaKnown RBP11.4□□□□□ -0.59
CSMD2-202ENST00000338325 VPS18Q9P253 973 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 CNOT8Q9UFF9 292 aaKnown RBP11.4□□□□□ -0.59
CSMD2-202ENST00000338325 TBC1D29Q9UFV1 150 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 KLHL3Q9UH77 587 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 ZNHIT2Q9UHR6 403 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 RPS6KL1Q9Y6S9 549 aa11.4□□□□□ -0.59
CSMD2-202ENST00000338325 MN1Q10571 1320 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-202ENST00000338325 USP9XQ93008 2570 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-202ENST00000338325 A0A0J9YYE9 177 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 INPP4BO15327 924 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 DNAJC6O75061 913 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 TRBC1P01850 177 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 PDHA1P08559 390 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 ANKRD34CP0C6C1 535 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 SLC2A4P14672 509 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 NR1D1P20393 614 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 AMPD1P23109 780 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 ARL4AP40617 200 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms