RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ZNF846Q147U1 533 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 MAPK11Q15759 364 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 C8orf82Q6P1X6 216 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 LDB1Q86U70 411 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 C2orf69Q8N8R5 385 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 PDPRQ8NCN5 879 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 APPL2Q8NEU8 664 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 OR52K2Q8NGK3 314 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF347Q96SE7 839 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 PPP6CO00743 305 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 PIP5K1BO14986 540 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 BEST1O76090 585 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 C7P10643 843 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 EDNRBP24530 442 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 ARNTP27540 789 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 CHRNA4P43681 627 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 PLA2G16P53816 162 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 MAP3K7CLP57077 242 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 INAQ16352 499 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 GPR158Q5T848 1215 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 R3HCC1LQ7Z5L2 792 aaKnown RBP13.69□□□□□ -0.22
SYNE3-201ENST00000334258 MINDY1Q8N5J2 469 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 OSCP1Q8WVF1 389 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 EDEM1Q92611 657 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 TMEM74Q96NL1 305 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 GSTO2Q9H4Y5 243 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 C8orf4Q9NR00 106 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 INTS10Q9NVR2 710 aaKnown RBP13.69□□□□□ -0.22
SYNE3-201ENST00000334258 ERAP1Q9NZ08 941 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 KLK14Q9P0G3 267 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 NOX1Q9Y5S8 564 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 C16orf96A6NNT2 1141 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 PSMD3O43242 534 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 AQP9O43315 295 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 TSPAN1O60635 241 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 SLC25A27O95847 323 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 IMPDH1P20839 514 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 ENDOUP21128 410 aaKnown RBP13.69□□□□□ -0.22
SYNE3-201ENST00000334258 POLD2P49005 469 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 TAF2Q6P1X5 1199 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 GPR142Q7Z601 462 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 ANKRD49Q8WVL7 239 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 TNIP3Q96KP6 325 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 CSF3RQ99062 836 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 DNAJC15Q9Y5T4 150 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 SNX5Q9Y5X3 404 aa13.69□□□□□ -0.22
SYNE3-201ENST00000334258 OTOFQ9HC10 1997 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 FXYD1O00168 92 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 XYLBO75191 536 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ANXA9O76027 345 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SIX3O95343 332 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ARCN1P48444 511 aaKnown RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 KCNK10P57789 538 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 LSM3P62310 102 aaKnown RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 BEX3Q00994 111 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SPCS2Q15005 226 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 AASDHQ4L235 1098 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 IRAK1BP1Q5VVH5 260 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CYHR1Q6ZMK1 362 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CTU1Q7Z7A3 348 aaKnown RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 NPLOC4Q8TAT6 608 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SH3YL1Q96HL8 342 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 MAGED4Q96JG8 741 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ULBP1Q9BZM6 244 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CEP44Q9C0F1 390 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ABCD2Q9UBJ2 740 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 VPS51Q9UID3 782 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 BAG5Q9UL15 447 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 B3GNT3Q9Y2A9 372 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 GIT1Q9Y2X7 761 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 MAGED1Q9Y5V3 778 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 MAN1A2O60476 641 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SEC14L2O76054 403 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 AKAP5P24588 427 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 DNAJB2P25686 324 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SHMT2P34897 504 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 HPCAL1P37235 193 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SH3BP2P78314 561 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 C9orf57Q5W0N0 161 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CRYBG2Q8N1P7 616 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 TWIST2Q8WVJ9 160 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SDCCAG3Q96C92 435 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 TRMOQ9BU70 441 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 TDRD1Q9BXT4 1180 aaKnown RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SCN1AP35498 2009 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 I6L893 689 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CCL22O00626 93 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ABCB7O75027 752 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 BCAS1O75363 584 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms