RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 GRAMD1BQ3KR37 738 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 RAB44Q7Z6P3 723 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 PQLC1Q8N2U9 271 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 AUTS2Q8WXX7 1259 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 KIAA1191Q96A73 305 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 AKTIPQ9H8T0 292 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 SCOCQ9UIL1 159 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 PSMD13Q9UNM6 376 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 NPEPPSL1A6NEC2 478 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 NCF1BA6NI72 391 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 NCF1CA8MVU1 366 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 E7ENX8 843 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 H0Y626 953 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 TBL1XO60907 577 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 KERAO60938 352 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 NIPSNAP2O75323 286 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 MBL2P11226 248 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 NCF1P14598 390 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 EEF1DP29692 281 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 SMAD3P84022 425 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 TWF1Q12792 350 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 STX5Q13190 355 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 LRP8Q14114 963 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 FAM117BQ6P1L5 589 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 LAYNQ6UX15 382 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 STAG3L4Q8TBR4 150 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 DERL2Q9GZP9 239 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 SYTL2Q9HCH5 934 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 FCF1Q9Y324 198 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 MAGEA13PA6NCF6 341 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 CASQ2O14958 399 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 AZIN1O14977 448 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 PIP5K1BO14986 540 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 ECI2O75521 394 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 ZCCHC18P0CG32 403 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 RAD51Q06609 339 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 RALGDSQ12967 914 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 ZRANB3Q5FWF4 1079 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 ATXN7L2Q5T6C5 722 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 TMEM150AQ86TG1 271 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 FBXO39Q8N4B4 442 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 SIDT2Q8NBJ9 832 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 TWIST2Q8WVJ9 160 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 PPP2R3CQ969Q6 453 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 ZFRQ96KR1 1074 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 KLHL32Q96NJ5 620 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 ADGRE3Q9BY15 652 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 VCX3BQ9H321 246 aa14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 SEMA4BQ9NPR2 832 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 UTP6Q9NYH9 597 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-201ENST00000331433 LCHNA4D1U4 455 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 PRRG1O14668 218 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 ACOT8O14734 319 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 STX7O15400 261 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 RNASEH1O60930 286 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 BCAS2O75934 225 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 SOD2P04179 222 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 SNRPB2P08579 225 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 BMP1P13497 986 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 ZXDBP98169 803 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 ILF2Q12905 390 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 MAPRE2Q15555 327 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 GSTA3Q16772 222 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 DDIASQ8IXT1 998 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 WFDC5Q8TCV5 224 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 VCXQ9H320 206 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 TUBB1Q9H4B7 451 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 ZDHHC7Q9NXF8 308 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 BTRCQ9Y297 605 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 TANC1Q9C0D5 1861 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 CAPN8A6NHC0 703 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 BTN3A1O00481 513 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 PRAMEF12O95522 483 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 LYNP07948 512 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 AGTR2P50052 363 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 ECT2LQ008S8 904 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 CLCQ05315 142 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 GRB7Q14451 532 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 KIF19Q2TAC6 998 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 CTSL3PQ5NE16 218 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 OR52E8Q6IFG1 317 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 NCEH1Q6PIU2 408 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 DNAJB7Q7Z6W7 309 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 FUNDC1Q8IVP5 155 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 FUBP1Q96AE4 644 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 NR1H4Q96RI1 486 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 TCF12Q99081 682 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 SLC39A3Q9BRY0 314 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 PCDHAC1Q9H158 963 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 COPS7BQ9H9Q2 264 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 LHX3Q9UBR4 397 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 TRIM17Q9Y577 477 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 PCDHB9Q9Y5E1 797 aa14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 OAS3Q9Y6K5 1087 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-201ENST00000331433 C9JVG2 144 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 TRIM38O00635 465 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 MRASO14807 208 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 MAP3K13O43283 966 aa14.77□□□□□ -0.04
CLCNKA-201ENST00000331433 FKTNO75072 461 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms