RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TNPO3Q9Y5L0 923 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 EIF1AXP47813 144 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 SLC34A1Q06495 639 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ITGA7Q13683 1181 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 GDF6Q6KF10 455 aaPredicted RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 CHSY3Q70JA7 882 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 VWDEQ8N2E2 1590 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SMG7Q92540 1137 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 CHID1Q9BWS9 393 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 GSDMCQ9BYG8 508 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 TTC24A2A3L6 582 aaPredicted RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 PCP4L1A6NKN8 68 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 WRBO00258 174 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 NR4A1P22736 598 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 HJURPQ8NCD3 748 aaPredicted RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 RP9Q8TA86 221 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 BRSK1Q8TDC3 778 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 UBE2E3Q969T4 207 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 C1GALT1C1Q96EU7 318 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ITCHQ96J02 903 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SEMA3GQ9NS98 782 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 KBTBD4Q9NVX7 518 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SEC14L3Q9UDX4 400 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SSR3Q9UNL2 185 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ZFP37Q9Y6Q3 630 aaPredicted RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 CPS1P31327 1500 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 B4DGG1 531 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 MLYCDO95822 493 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ATP4AP20648 1035 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ARCN1P48444 511 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 MXD1Q05195 221 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 PPP3CAQ08209 521 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SULT1C3Q6IMI6 304 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 BHLHB9Q6PI77 547 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 FAM131AQ6UXB0 335 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 HDDC3Q8N4P3 179 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 MYO19Q96H55 970 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 PORCNQ9H237 461 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 DNAJC11Q9NVH1 559 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ENOPH1Q9UHY7 261 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ABCA9Q8IUA7 1624 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 RECQL5O94762 991 aaPredicted RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 CDK16Q00536 496 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 TAF10Q12962 218 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 MSANTD2Q6P1R3 559 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SLC43A3Q8NBI5 491 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SLC22A8Q8TCC7 542 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 CCDC115Q96NT0 180 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 CFAP20Q9Y6A4 193 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 A0A0A0MRY4 1105 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 GRXCR2A6NFK2 248 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 C9IYK1 514 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 C22orf31O95567 290 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 DDX6P26196 483 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLN8-201ENST00000331222 ACADLP28330 430 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 MTHFRP42898 656 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 GJA9P57773 515 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 RPL7AP62424 266 aaKnown RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 MCL1Q07820 350 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SPIRE1Q08AE8 756 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 GK5Q6ZS86 529 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 HMGB4Q8WW32 186 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 SPATA13Q96N96 652 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 TOR3AQ9H497 397 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 FAM105AQ9NUU6 356 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 KIAA1522Q9P206 1035 aaPredicted RBP10.54□□□□□ -0.72
CLN8-201ENST00000331222 CKLFQ9UBR5 152 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 ADAM28Q9UKQ2 775 aa10.54□□□□□ -0.72
CLN8-201ENST00000331222 AP2A2O94973 939 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ADRB2P07550 413 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ARFIP1P53367 373 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 AP2S1P53680 142 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 ADARP55265 1226 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 TLR1Q15399 786 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 LDLRAP1Q5SW96 308 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 FAM182AQ5T1J6 154 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 VITQ6UXI7 678 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 SLC22A15Q8IZD6 547 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 GGA2Q9UJY4 613 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 HYKKA2RU49 373 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 H3BQF6 201 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 PER2O15055 1255 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 CDC40O60508 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLN8-201ENST00000331222 SEC24AO95486 1093 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 TRBC1P01850 177 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 CDH5P33151 784 aaPredicted RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 MNDAP41218 407 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 TXNL4AP83876 142 aaKnown RBP10.53□□□□□ -0.72
CLN8-201ENST00000331222 ENPEPQ07075 957 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 NEK5Q6P3R8 708 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 KCNK18Q7Z418 384 aa10.53□□□□□ -0.72
CLN8-201ENST00000331222 GALNT13Q8IUC8 556 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms