RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 F5H423 210 aaPredicted RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TM4SF5O14894 197 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 PLRG1O43660 514 aaKnown RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3HP0C7X1 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 ENGP17813 658 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 CR2P20023 1033 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 MAT2AP31153 395 aaKnown RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 POLD2P49005 469 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 CSNK1EP49674 416 aaKnown RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 ATP1A2P50993 1020 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 SLC1A5Q15758 541 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 UGP2Q16851 508 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 WDR45BQ5MNZ6 344 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3GQ6DHY5 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3CQ6IPX1 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 PLPP6Q8IY26 295 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 SRRM1Q8IYB3 904 aaKnown RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3Q8IZP1 549 aaPredicted RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 CYP4X1Q8N118 509 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 RYBPQ8N488 228 aaPredicted RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 ACMSDQ8TDX5 336 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 ZBTB9Q96C00 473 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 SRPK1Q96SB4 655 aaKnown RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 SELENOSQ9BQE4 189 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 EDEM2Q9BV94 578 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 ZFATQ9P243 1243 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 CTNNAL1Q9UBT7 734 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 SLC6A14Q9UN76 642 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TCAF1Q9Y4C2 921 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 PCDH15Q96QU1 1955 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 ZCWPW2A0A1B0GU75 182 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 C1QTNF3-AMACRE9PGA6 284 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 TM9SF1O15321 606 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 BCAT2O15382 392 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 SPINT1O43278 529 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 USP12O75317 370 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ZWINTO95229 277 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 NDST3O95803 873 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 GSRP00390 522 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PRNPP04156 253 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 GP5P40197 560 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 RECQLP46063 649 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ID4P47928 161 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 CSE1LP55060 971 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 RHOAP61586 193 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 GNGT1P63211 74 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 DSC2Q02487 901 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 MTM1Q13496 603 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 LRRC73Q5JTD7 316 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 CERCAMQ5T4B2 595 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PARS2Q7L3T8 475 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PGBD5Q8N414 524 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 CALML6Q8TD86 181 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 SCG3Q8WXD2 468 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 KLK6Q92876 244 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ZNF669Q96BR6 464 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 C19orf43Q9BQ61 176 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ADGRE3Q9BY15 652 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PCED1AQ9H1Q7 454 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 TM9SF3Q9HD45 589 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 SCUBE2Q9NQ36 999 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 MKS1Q9NXB0 559 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 GGT7Q9UJ14 662 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ZFR2Q9UPR6 939 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 TMEM120BA0PK00 339 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PRR5-ARHGAP8B1AHC4 643 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PIGNO95427 931 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 POP4O95707 220 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 WNT1P04628 370 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 UGT2B4P06133 528 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 CD27P26842 260 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 SPRP35270 261 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 HOXD12P35452 270 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 AP1S1P61966 158 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 SNRPD1P62314 119 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ARHGAP8P85298 464 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PDE1BQ01064 536 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 KIAA0930Q6ICG6 404 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ERN2Q76MJ5 926 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 MZB1Q8WU39 189 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 SLC6A18Q96N87 628 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 KLHL32Q96NJ5 620 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 HDAC8Q9BY41 377 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 CAAP1Q9H8G2 361 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 IL21RQ9HBE5 538 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 KCNK9Q9NPC2 374 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 PPANQ9NQ55 473 aaKnown RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 ITM2BQ9Y287 266 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 CA5BQ9Y2D0 317 aa16.42■□□□□ 0.22
PDLIM1-201ENST00000329399 A0A1B0GVT2 93 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 A0A1W2PPC4 97 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 LRRC72A6NJI9 287 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 C16orf96A6NNT2 1141 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 SLC30A4O14863 429 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 LATO43561 262 aa16.41■□□□□ 0.22
PDLIM1-201ENST00000329399 CHN1P15882 459 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms