RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 OR2T3Q8NH03 318 aa17.98■□□□□ 0.47
SYNE4-201ENST00000324444 PLEKHG4BQ96PX9 1271 aa17.98■□□□□ 0.47
SYNE4-201ENST00000324444 ACOX2Q99424 681 aa17.98■□□□□ 0.47
SYNE4-201ENST00000324444 RSPH9Q9H1X1 276 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-201ENST00000324444 B4GALT6Q9UBX8 382 aa17.98■□□□□ 0.47
SYNE4-201ENST00000324444 CCDC162PA2VCL2 907 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 NPIPB15A6NHN6 443 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-201ENST00000324444 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 TRIM49D1C9J1S8 452 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 AURKAO14965 403 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 ATG13O75143 517 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 CLDN7O95471 211 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 ITGA2BP08514 1039 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 ITGALP20701 1170 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 SLC18A1P54219 525 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 TMPRSS15P98073 1019 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 LRRC66Q68CR7 880 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 ERN2Q76MJ5 926 aaKnown RBP17.97■□□□□ 0.47
SYNE4-201ENST00000324444 SRRM1Q8IYB3 904 aaKnown RBP17.97■□□□□ 0.47
SYNE4-201ENST00000324444 TSPAN17Q96FV3 270 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 AGAP2Q99490 1192 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 MTG2Q9H4K7 406 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 PCDH12Q9NPG4 1184 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 KCTD3Q9Y597 815 aa17.97■□□□□ 0.47
SYNE4-201ENST00000324444 DMXL1Q9Y485 3027 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 CHURC1-FNTBB4DL54 471 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 K7ESF4 209 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 SLC4A1P02730 911 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 BRAFP15056 766 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 MC4RP32245 332 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 SLC1A2P43004 574 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 FNTBP49356 437 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 SERPINB8P50452 374 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 ARSDP51689 593 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 SLC12A2P55011 1212 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 SEC13P55735 322 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 DMWDQ09019 674 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 ITGA9Q13797 1035 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 KDM7AQ6ZMT4 941 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 PARS2Q7L3T8 475 aaKnown RBP17.96■□□□□ 0.47
SYNE4-201ENST00000324444 LCA5Q86VQ0 697 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 MMAAQ8IVH4 418 aaKnown RBP17.96■□□□□ 0.47
SYNE4-201ENST00000324444 KIAA2013Q8IYS2 634 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 NRSN1Q8IZ57 195 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 CYP4X1Q8N118 509 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 ULK4Q96C45 1275 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 ZDHHC4Q9NPG8 344 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 NCDNQ9UBB6 729 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 NFKBIL1Q9UBC1 381 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-201ENST00000324444 GGT7Q9UJ14 662 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 COMMD10Q9Y6G5 202 aa17.96■□□□□ 0.47
SYNE4-201ENST00000324444 MYLKQ15746 1914 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 GLYATL1P3A0A0U1RQE8 302 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 BUD23O43709 281 aaKnown RBP17.95■□□□□ 0.46
SYNE4-201ENST00000324444 AP1G1O43747 822 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 NDUFS3O75489 264 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 KLF8O95600 359 aaPredicted RBP17.95■□□□□ 0.46
SYNE4-201ENST00000324444 AHSGP02765 367 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 MPOP05164 745 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 ADRB3P13945 408 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 HOXB2P14652 356 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
SYNE4-201ENST00000324444 CCT5P48643 541 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 STC1P52823 247 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 DCDC1P59894 354 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 CST6Q15828 149 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 TYSND1Q2T9J0 566 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 C2orf27AQ580R0 203 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 ZRANB3Q5FWF4 1079 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 MROH9Q5TGP6 573 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 SNX20Q7Z614 316 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 ZC3HC1Q86WB0 502 aaKnown RBP17.95■□□□□ 0.46
SYNE4-201ENST00000324444 IL17RCQ8NAC3 791 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 MZB1Q8WU39 189 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 VPS39Q96JC1 886 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 GPR22Q99680 433 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 IQCGQ9H095 443 aaKnown RBP17.95■□□□□ 0.46
SYNE4-201ENST00000324444 CCDC68Q9H2F9 335 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 NKIRAS1Q9NYS0 192 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 IL1RAPL1Q9NZN1 696 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 FKBPLQ9UIM3 349 aa17.95■□□□□ 0.46
SYNE4-201ENST00000324444 F8W8V4 182 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 GOLGA8TH3BQL2 631 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 NEMP1O14524 444 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 PRPF4O43172 522 aaKnown RBP eCLIP17.94■□□□□ 0.46
SYNE4-201ENST00000324444 UGT1A9O60656 530 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 ADAM23O75077 832 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 PIAS1O75925 651 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 SRP72O76094 671 aaKnown RBP17.94■□□□□ 0.46
SYNE4-201ENST00000324444 ELFN1P0C7U0 828 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 KRT4P19013 534 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 CRABP2P29373 138 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 FOXN2P32314 431 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 MMP12P39900 470 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 PSMD8P48556 350 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 SPINT3P49223 89 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 POU4F1Q01851 419 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 PTSQ03393 145 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 CTBP1Q13363 440 aa17.94■□□□□ 0.46
SYNE4-201ENST00000324444 SEPT7Q16181 437 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms