RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ALKQ9UM73 1620 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 UNC13BO14795 1591 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 A0A087X0B3 334 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 XYLBO75191 536 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 SERPINA6P08185 405 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 EPHX2P34913 555 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 CAP2P40123 477 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 CASP9P55211 416 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 RPL6Q02878 288 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 RGS1Q08116 209 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 THAP5Q7Z6K1 395 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 YTHDF3Q7Z739 585 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 RBM23Q86U06 439 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 TXNRD3Q86VQ6 643 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 SLC22A16Q86VW1 577 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 MRPL57Q9BQC6 102 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 ULBP1Q9BZM6 244 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 SNTG1Q9NSN8 517 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PDP1Q9P0J1 537 aaPredicted RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 ZNF638Q14966 1978 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 A0A088AWK7 358 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 OR2AT4A6NND4 320 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 AZIN1O14977 448 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 HGFP14210 728 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZNF10P21506 573 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 ACADLP28330 430 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 KLF10Q13118 480 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 NFE2Q16621 373 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 MAPKAPK3Q16644 382 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 GTPBP3Q969Y2 492 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZNF518BQ9C0D4 1074 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 TNFRSF8P28908 595 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SLC20A2Q08357 652 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 UAP1L1Q3KQV9 507 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SYCE2Q6PIF2 218 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZNF34Q8IZ26 560 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PKDREJQ9NTG1 2253 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LIASO43766 372 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ARL3P36405 182 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 DNASE1L1P49184 302 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LIN52Q52LA3 116 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 RASAL3Q86YV0 1011 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 GLIS3Q8NEA6 775 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LNX1Q8TBB1 728 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 RNF31Q96EP0 1072 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SPATC1LQ9H0A9 340 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 CYP3A43Q9HB55 503 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 IQSEC2Q5JU85 1478 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LOXHD1Q8IVV2 1947 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SAGE2PA6NJ88 616 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 EML1O00423 815 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 AMHP03971 560 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 GIMD1P0DJR0 217 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SERPINA4P29622 427 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 DCDC1P59894 354 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SWT1Q5T5J6 900 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 CUZD1Q86UP6 607 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ECHDC2Q86YB7 292 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PTCD3Q96EY7 689 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 FERD3LQ96RJ6 166 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 RGS10O43665 173 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 RECQL4O94761 1208 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LHCGRP22888 699 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 KDELR1P24390 212 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 RPL22P35268 128 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 SLC6A3Q01959 620 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SLC1A5Q15758 541 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 GCNT6Q5T4J0 391 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 VWA5B1Q5TIE3 1220 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 RETSATQ6NUM9 610 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZNF730Q6ZMV8 503 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ALLCQ8N6M5 410 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PIK3C3Q8NEB9 887 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SERPINB11Q96P15 392 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ASB8Q9H765 288 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D17Q9HA65 648 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PREBQ9HCU5 417 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 AKAP7Q9P0M2 348 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 PCDH10Q9P2E7 1040 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PRPF19Q9UMS4 504 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 I3L521 148 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 NARSO43776 548 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 KLF1Q13351 362 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 PDK4Q16654 411 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 FSCN1Q16658 493 aaKnown RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 RALGPS1Q5JS13 557 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 CMC1Q7Z7K0 106 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 OR10H4Q8NGA5 316 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 HAVCR1Q96D42 359 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 GPER1Q99527 375 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 AIFM2Q9BRQ8 373 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 C1QTNF7Q9BXJ2 289 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PRKD2Q9BZL6 878 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 MAP4K5Q9Y4K4 846 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 TRAV19A0A0A6YYK7 116 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SLC35F4A4IF30 521 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 CSH1P0DML2 217 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms