RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CD6P30203 668 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 CCR5P51681 352 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ITGA9Q13797 1035 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 RASA2Q15283 850 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ZNF284Q2VY69 593 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 FASTKD1Q53R41 847 aaKnown RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 AARS2Q5JTZ9 985 aaKnown RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 SNX20Q7Z614 316 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 PTAR1Q7Z6K3 402 aaPredicted RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 FBXL6Q8N531 539 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 TRAM1L1Q8N609 369 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 AP2M1Q96CW1 435 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 NUS1Q96E22 293 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 TCF12Q99081 682 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 DHRS4Q9BTZ2 278 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ZSCAN5AQ9BUG6 496 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 RIOK2Q9BVS4 552 aaKnown RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 C1QTNF7Q9BXJ2 289 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ROPN1BQ9BZX4 212 aaPredicted RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 PCED1AQ9H1Q7 454 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ROPN1Q9HAT0 212 aaPredicted RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 IARS2Q9NSE4 1012 aaKnown RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 SMOXQ9NWM0 555 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ZNF446Q9NWS9 450 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 IL1RAPL1Q9NZN1 696 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 SLC24A2Q9UI40 661 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 CYP8B1Q9UNU6 501 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 COQ6Q9Y2Z9 468 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 THADAQ6YHU6 1953 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 OR51F1A6NGY5 319 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 GOLGA8KD6RF30 607 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 GOLGA8TH3BQL2 631 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 LAMTOR5O43504 91 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 LATO43561 262 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 PYGLP06737 847 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TDGF1P13385 188 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TEAD1P28347 426 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 NUDT1P36639 197 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 IFFO1Q0D2I5 559 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SGCGQ13326 291 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 NFATC2Q13469 925 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CHRNA6Q15825 494 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TYSND1Q2T9J0 566 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 LYPLAL1Q5VWZ2 237 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SEL1L3Q68CR1 1132 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 ZNF470Q6ECI4 717 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CERS6Q6ZMG9 384 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TDRPQ86YL5 185 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CTAGE3PQ8IX95 158 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 PPM1NQ8N819 430 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TMEM105Q8N8V8 129 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 C2CD4AQ8NCU7 369 aaPredicted RBP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SCAMP4Q969E2 229 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 LENG8Q96PV6 779 aaPredicted RBP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 AGAP2Q99490 1192 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CPNE1Q99829 537 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SLC17A9Q9BYT1 436 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 ASB8Q9H765 288 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 INTS10Q9NVR2 710 aaKnown RBP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 MARCH4Q9P2E8 410 aaPredicted RBP13.53□□□□□ -0.24
PRPF18-201ENST00000320054 CD84Q9UIB8 345 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 FBXO5Q9UKT4 447 aa13.53□□□□□ -0.24
PRPF18-201ENST00000320054 SPAG17Q6Q759 2223 aa13.52□□□□□ -0.24
PRPF18-201ENST00000320054 PFDN6O15212 129 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 GCAP28676 217 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 PPARGP37231 505 aaPredicted RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 GP5P40197 560 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 SLC1A2P43004 574 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 PXNP49023 591 aaPredicted RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 TTPAP49638 278 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 PPP2CBP62714 309 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 PPP2CAP67775 309 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 FGL2Q14314 439 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 SEMA3AQ14563 771 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 EFTUD2Q15029 972 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 SETMARQ53H47 684 aaPredicted RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 ZRANB3Q5FWF4 1079 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 TMEM31Q5JXX7 168 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 RNF187Q5TA31 235 aaPredicted RBP13.52□□□□□ -0.25
PRPF18-201ENST00000320054 KIAA0895LQ68EN5 471 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 PSAPL1Q6NUJ1 521 aa13.52□□□□□ -0.25
PRPF18-201ENST00000320054 C1orf210Q8IVY1 113 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms