RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 RAP1GDS1P52306 607 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 PTPRCAPQ14761 206 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 CPNE9Q8IYJ1 553 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 RBFAQ8N0V3 343 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 TMEM159Q96B96 161 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ANAPC2Q9UJX6 822 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 MATN2O00339 956 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 PIP5K1BO14986 540 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 VCLP18206 1134 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 OGNP20774 298 aaKnown RBP13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 SLC11A1P49279 550 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 CDC16Q13042 620 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 IRF5Q13568 498 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 GPR141Q7Z602 305 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 STK32CQ86UX6 486 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 CDKN2AIPNLQ96HQ2 116 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 CFAP97Q9P2B7 532 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 SLC13A4Q9UKG4 626 aa13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 COPG1Q9Y678 874 aaKnown RBP13.37□□□□□ -0.27
PCDHB9-201ENST00000316105 ZCWPW2A0A1B0GU75 182 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 HAS3O00219 553 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 OTCP00480 354 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 VAC14Q08AM6 782 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 REP15Q6BDI9 236 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PAQR3Q6TCH7 311 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SAPCD2Q86UD0 394 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 ARL14EPQ8N8R7 260 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 MRGPRX2Q96LB1 330 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 C9orf16Q9BUW7 83 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 GNG14A0A1W2PPG7 69 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 DHRS12A0PJE2 317 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 F8W810 466 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 THOP1P52888 689 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PFKPQ01813 784 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 CPSF6Q16630 551 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 ATXN7L2Q5T6C5 722 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 YAF2Q8IY57 180 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 UCMAQ8WVF2 138 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 C1orf21Q9H246 121 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 TMEM248Q9NWD8 314 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 TMCO1Q9UM00 188 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 MYRFQ9Y2G1 1151 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 AK5Q9Y6K8 562 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 ARVCFO00192 962 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 LIN7AO14910 233 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SLC22A3O75751 556 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PCNAP12004 261 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 POLR2LP62875 67 aaKnown RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 OCA2Q04671 838 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 LRRC74AQ0VAA2 488 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 GPR17Q13304 367 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 POM121L1PQ3SYA9 428 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 C16orf87Q6PH81 154 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 C2CD4AQ8NCU7 369 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 EURLQ9NYK6 297 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 STX16-NPEPL1H3BU86 382 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 KPNA3O00505 521 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 AOC2O75106 756 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SNNO75324 88 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 TIPRLO75663 272 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 LYNP07948 512 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SLC35E2BP0CK96 405 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 CYBAP13498 195 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SOAT1P35610 550 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 CCNHP51946 323 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 NAA20P61599 178 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 XIAPP98170 497 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PIK3R6Q5UE93 754 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 PM20D1Q6GTS8 502 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 CAMK1DQ8IU85 385 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 CILP2Q8IUL8 1156 aa13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 TXNDC5Q8NBS9 432 aaKnown RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
PCDHB9-201ENST00000316105 SLC25A14O95258 325 aaPredicted RBP13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 PRAMEF1O95521 474 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 S100A3P33764 101 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 AQP4P55087 323 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 STARD3Q14849 445 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 RNF19BQ6ZMZ0 732 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 ZNF534Q76KX8 674 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 TAGAPQ8N103 731 aa13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
PCDHB9-201ENST00000316105 TCF12Q99081 682 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms