RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 HCSTQ9UBK5 93 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 PRKAG3Q9UGI9 489 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 FGF3P11487 239 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-201ENST00000314191 NIPAL4Q0D2K0 466 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 UBE2R2Q712K3 238 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-201ENST00000314191 FAM9CQ8IZT9 166 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 UMODL1-AS1Q8N2C9 162 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 NOL11Q9H8H0 719 aaKnown RBP6.17□□□□□ -1.42
PRKDC-201ENST00000314191 HPS4Q9NQG7 708 aa6.17□□□□□ -1.42
PRKDC-201ENST00000314191 POLR3HQ9Y535 204 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-201ENST00000314191 NRP2O60462 931 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CCL5P13501 91 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 HTRA3P83110 453 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 OCA2Q04671 838 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SLC30A9Q6PML9 568 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 REM2Q8IYK8 340 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PQLC1Q8N2U9 271 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 DPP7Q9UHL4 492 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZSCAN9O15535 394 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ALOX15P16050 662 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PITRM1Q5JRX3 1037 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CHST9Q7L1S5 443 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 RRM2BQ7LG56 351 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ING5Q8WYH8 240 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CIB1Q99828 191 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 OXCT2Q9BYC2 517 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 IPPKQ9H8X2 491 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SIRPGQ9P1W8 387 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ACTL7AQ9Y615 435 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 C2orf78A6NCI8 922 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CAPN8A6NHC0 703 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PIP5K1BO14986 540 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 GKP32189 559 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 GRAMD4Q6IC98 578 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PRMT9Q6P2P2 845 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SPPL2AQ8TCT8 520 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TSEN34Q9BSV6 310 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SQORQ9Y6N5 450 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TAF1AQ15573 450 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CYS1Q717R9 158 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 P3H2Q8IVL5 708 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CLHC1Q8NHS4 586 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 C2orf15Q8WU43 125 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 C1orf74Q96LT6 269 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TMEM248Q9NWD8 314 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 FAM32AQ9Y421 112 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 VPS4BO75351 444 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ALDOAP04075 364 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 NTRK1P04629 796 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF461Q8TAF7 563 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 OLIG1Q8TAK6 271 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PGAP3Q96FM1 320 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 IGSF21Q96ID5 467 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 MARCH4Q9P2E8 410 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 RNASEH1O60930 286 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 IMPDH1P20839 514 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ATP6V1C1P21283 382 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CCT8P50990 548 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 MAPKAPK3Q16644 382 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CLLU1OSQ5K130 101 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CNKSR3Q6P9H4 555 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TBC1D19Q8N5T2 526 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 IL12RB2Q99665 862 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ATG10Q9H0Y0 220 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 INTS10Q9NVR2 710 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CDC7O00311 574 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TBC1D4O60343 1298 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ADAMTS4O75173 837 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 LRATO95237 230 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CLPTM1O96005 669 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 VCLP18206 1134 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 IRX1P78414 480 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF33AQ06730 810 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 GPR180Q86V85 440 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PIM3Q86V86 326 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SPPL2CQ8IUH8 684 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF557Q8N988 423 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PLD4Q96BZ4 506 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 RTP4Q96DX8 246 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF599Q96NL3 588 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 S100A14Q9HCY8 104 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 INVSQ9Y283 1065 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZCWPW2A0A1B0GU75 182 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 COCHO43405 550 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 WDR47O94967 919 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 AP1S1P61966 158 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CACNG1Q06432 222 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.16□□□□□ -1.422e-7■■■■■ 36.1
PRKDC-201ENST00000314191 NECAB2Q7Z6G3 386 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 EEF1AKMT1Q8WVE0 214 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 OSCP1Q8WVF1 389 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ANAPC2Q9UJX6 822 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TTC36A6NLP5 189 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 C16orf96A6NNT2 1141 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 M0QZQ0 153 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 AURKAO14965 403 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 GRM6O15303 877 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 CYP11A1P05108 521 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZFP1Q6P2D0 407 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SH3RF2Q8TEC5 729 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms