RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PTSQ03393 145 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 FCHO2Q0JRZ9 810 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 GAB4Q2WGN9 574 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 LYPLAL1Q5VWZ2 237 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 CES5AQ6NT32 575 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 FAM151BQ6UXP7 276 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 NAPRTQ6XQN6 538 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 TSPAN33Q86UF1 283 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 TDHQ8IZJ6 230 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 KDM1BQ8NB78 822 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 HCAR2Q8TDS4 363 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 SORT1Q99523 831 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 OSBPL1AQ9BXW6 950 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 UNKQ9C0B0 810 aaKnown RBP16.65■□□□□ 0.26
CLCF1-201ENST00000312438 ASB8Q9H765 288 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 IL36AQ9UHA7 158 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 DNAJC16Q9Y2G8 782 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 WASF2Q9Y6W5 498 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 GLYATL1P3A0A0U1RQE8 302 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 GAPDHSO14556 408 aaPredicted RBP16.64■□□□□ 0.25
CLCF1-201ENST00000312438 OR1I1O60431 355 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 VPS26AO75436 327 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 LEFTY1O75610 366 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 UBOX5O94941 541 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 ESR1P03372 595 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 ZNF37AP17032 561 aaPredicted RBP16.64■□□□□ 0.25
CLCF1-201ENST00000312438 SP100P23497 879 aaPredicted RBP16.64■□□□□ 0.25
CLCF1-201ENST00000312438 NFKBIAP25963 317 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 SKIV2L2P42285 1042 aaKnown RBP16.64■□□□□ 0.25
CLCF1-201ENST00000312438 NAGLUP54802 743 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 DNAJB13P59910 316 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 PFKPQ01813 784 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 NFATC2Q13469 925 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 EIF4HQ15056 248 aaKnown RBP16.64■□□□□ 0.25
CLCF1-201ENST00000312438 GPR33Q49SQ1 333 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 ARSIQ5FYB1 569 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 ZDHHC20Q5W0Z9 365 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 LRRC66Q68CR7 880 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 VITQ6UXI7 678 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 ISCA2Q86U28 154 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 GRIN3AQ8TCU5 1115 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 DRC3Q9H069 523 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 HPS4Q9NQG7 708 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 MARCOQ9UEW3 520 aaPredicted RBP16.64■□□□□ 0.25
CLCF1-201ENST00000312438 FAM50BQ9Y247 325 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 MED16Q9Y2X0 877 aa16.64■□□□□ 0.25
CLCF1-201ENST00000312438 PRRT4C9JH25 899 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 HSPA4LO95757 839 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 ZNF7P17097 686 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 TFEBP19484 476 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 ARRB2P32121 409 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 YAF2Q8IY57 180 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 ST13P5Q8NFI4 369 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 KCNJ9Q92806 393 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 SGF29Q96ES7 293 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 P2RY12Q9H244 342 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 HEY2Q9UBP5 337 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 PCDHB1Q9Y5F3 818 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 OAS3Q9Y6K5 1087 aaKnown RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 TRBV5-4A0A0C4DH59 114 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 GOLGA8CPA6NN73 597 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 F8W8V4 182 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 PRMT5O14744 637 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 CHRM1P11229 460 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 CYP2A6P11509 494 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 CD1DP15813 335 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 AQP5P55064 265 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 BNIP1Q12981 228 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 RUNX3Q13761 415 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 SETMARQ53H47 684 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 UGT3A1Q6NUS8 523 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 PAQR3Q6TCH7 311 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 ATG14Q6ZNE5 492 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 SERPINA9Q86WD7 417 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 NKAPQ8N5F7 415 aaKnown RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 NXPE3Q969Y0 559 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 ILKAPQ9H0C8 392 aaPredicted RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 WWP1Q9H0M0 922 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 MYLK2Q9H1R3 596 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 S1PR5Q9H228 398 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 TFB2MQ9H5Q4 396 aaKnown RBP16.63■□□□□ 0.25
CLCF1-201ENST00000312438 CLEC1BQ9P126 229 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 DKK3Q9UBP4 350 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 B4GALT6Q9UBX8 382 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 SLC12A4Q9UP95 1085 aa16.63■□□□□ 0.25
CLCF1-201ENST00000312438 TSPAN11A1L157 253 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 HGSO14964 777 aaPredicted RBP16.62■□□□□ 0.25
CLCF1-201ENST00000312438 SNUPNO95149 360 aaKnown RBP16.62■□□□□ 0.25
CLCF1-201ENST00000312438 ZNF30P17039 623 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 PSMC3P17980 439 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 CHRM3P20309 590 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 LHCGRP22888 699 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 RPS3P23396 243 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLCF1-201ENST00000312438 SCTRP47872 440 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 CHRNA6Q15825 494 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 SPRED3Q2MJR0 410 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 ZNF805Q5CZA5 627 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 SPDYAQ5MJ70 313 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 CTSL3PQ5NE16 218 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms