RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PPP4R1Q8TF05 950 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 ANKRD49Q8WVL7 239 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 ZNF641Q96N77 438 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 ASB16Q96NS5 453 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 GATA5Q9BWX5 397 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 BPIFA1Q9NP55 256 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 DUS2Q9NX74 493 aaKnown RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 ERVW-1Q9UQF0 538 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 DNAJC16Q9Y2G8 782 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 A0A0U1RQS6 177 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 C1orf232A0A0U1RR37 186 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 A0A1W2PQ67 120 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 GAPDHSO14556 408 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 PFDN6O15212 129 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 DLX3O60479 287 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ADH1CP00326 375 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ATP5BP06576 529 aaKnown RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 RBP1P09455 135 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 CISD3P0C7P0 127 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 CCDC166P0CW27 439 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ADH5P11766 374 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ZNF37AP17032 561 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 POLR2EP19388 210 aaKnown RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 CD9P21926 228 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 FSHRP23945 695 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 HNF1BP35680 557 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 SKIV2L2P42285 1042 aaKnown RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 LIG3P49916 1009 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 CDKN1CP49918 316 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ADARP55265 1226 aaKnown RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 DNAJB13P59910 316 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 PFKPQ01813 784 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 CACNG1Q06432 222 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ASPHQ12797 758 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 GEN1Q17RS7 908 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 FAM91A1Q658Y4 838 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 KLC3Q6P597 504 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 DPY19L3Q6ZPD9 716 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 WDR75Q8IWA0 830 aaKnown RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 SPATA6LQ8N4H0 392 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 BPIFB1Q8TDL5 484 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 WFIKKN2Q8TEU8 576 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 SMARCD2Q92925 531 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 MRGPRX3Q96LB0 322 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 DRC3Q9H069 523 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 WWP1Q9H0M0 922 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 SUV39H2Q9H5I1 410 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 STN1Q9H668 368 aaKnown RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 ZFYVE1Q9HBF4 777 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 HEY2Q9UBP5 337 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 MED16Q9Y2X0 877 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 MTF2Q9Y483 593 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-205ENST00000307859 NUMBLQ9Y6R0 609 aa11.83□□□□□ -0.52
TRIM40-205ENST00000307859 UBA6A0AVT1 1052 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 HGSO14964 777 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TRIM24O15164 1050 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 KITP10721 976 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ATP5F1P24539 256 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 VIPR2P41587 438 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 NCALDP61601 193 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 RAD51Q06609 339 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 RCN2Q14257 317 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ACCSLQ4AC99 568 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SETMARQ53H47 684 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ZRANB3Q5FWF4 1079 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 IER5LQ5T953 404 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 Q6ZVU0 165 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CLNKQ7Z7G1 428 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 GPR149Q86SP6 731 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 MTDHQ86UE4 582 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ETFBKMTQ8IXQ9 262 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CBARPQ8N350 705 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TXNDC5Q8NBS9 432 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 OR2A12Q8NGT7 310 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 FRS2Q8WU20 508 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 EDAQ92838 391 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 FGF13Q92913 245 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CCDC126Q96EE4 140 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ASIC4Q96FT7 647 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SCRN2Q96FV2 425 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 BIRC8Q96P09 236 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 FAM96AQ9H5X1 160 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TRPV4Q9HBA0 871 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 OBP2AQ9NY56 170 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 MARCOQ9UEW3 520 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ZFP69BQ9UJL9 534 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SLC27A6Q9Y2P4 619 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 COMMD10Q9Y6G5 202 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 OAS3Q9Y6K5 1087 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 NPIPB15A6NHN6 443 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ZNF195O14628 629 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SRP72O76094 671 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms