RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ADCYAP1R1P41586 468 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 ZBED5Q49AG3 693 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 FAM35AQ86V20 835 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 FSTL5Q8N475 847 aaPredicted RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 C2orf49Q9BVC5 232 aaPredicted RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 GLIS2Q9BZE0 524 aaPredicted RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 OSGEPL1Q9H4B0 414 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 ADARB2Q9NS39 739 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 RAD18Q9NS91 495 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 TCAF1Q9Y4C2 921 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 DYRK3O43781 588 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 FABP3P05413 133 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 PIRTP0C851 137 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MYL9P24844 172 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 FCGRTP55899 365 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MERTKQ12866 999 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC9B1Q4ZJI4 515 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 PDSS2Q86YH6 399 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC39A8Q9C0K1 460 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 ARHGEF4Q9NR80 690 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SMPD4Q9NXE4 827 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MRPS7Q9Y2R9 242 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 PLOD3O60568 738 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 AOC1P19801 751 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MC4RP32245 332 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MPP1Q00013 466 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 XKR6Q5GH73 641 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 EMC10Q5UCC4 262 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 TRMT10BQ6PF06 316 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 TMPRSS4Q9NRS4 437 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 INTS10Q9NVR2 710 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC9A8Q9Y2E8 581 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 AQP12BA6NM10 295 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 FTH1P02794 183 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 UROSP10746 265 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MAGP20916 626 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 CCNCP24863 283 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 RCVRNP35243 200 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SCNN1GP51170 649 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 POU5F1Q01860 360 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 CLCQ05315 142 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 ACOX1Q15067 660 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 AQP12AQ8IXF9 295 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC34A3Q8N130 599 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 YTHDF1Q9BYJ9 559 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 DNAAF2Q9NVR5 837 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 MOXD2PA6NHM9 499 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 A8MX80 341 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 AIREO43918 545 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 LRATO95237 230 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 DHFRP00374 187 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CXCR2P25025 360 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ADAM17P78536 824 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 LGALS3BPQ08380 585 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CXXC5Q7LFL8 322 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 RBFAQ8N0V3 343 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ZFP28Q8NHY6 868 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CCDC59Q9P031 241 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 SUCOQ9UBS9 1254 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CYP7B1O75881 506 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 BHLHB9Q6PI77 547 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 LRTM1Q9HBL6 345 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 APOBEC3GQ9HC16 384 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 MKL2Q9ULH7 1088 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CNOT6Q9ULM6 557 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ZNF232Q9UNY5 417 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 M0R2N6 131 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 SERPINB7O75635 380 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 KLHL18O94889 574 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 RPL9P32969 192 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 HTR7P34969 479 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 NRG1Q02297 640 aaPredicted RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 DDI2Q5TDH0 399 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 COPS5Q92905 334 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 TOP1MTQ969P6 601 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 FNDC11Q9BVV2 318 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 DNMT3LQ9UJW3 386 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 STOML2Q9UJZ1 356 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 PAGE1O75459 146 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CKBP12277 381 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 PRG2P13727 222 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ARF4P18085 180 aaPredicted RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ARL2P36404 184 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 CPNE8Q86YQ8 564 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 DENND6AQ8IWF6 608 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 TEX47Q8TBZ9 253 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 PIK3R3Q92569 461 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 FAXDC2Q96IV6 333 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 KAT8Q9H7Z6 458 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ZNF490Q9ULM2 529 aaPredicted RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 TIMM22Q9Y584 194 aa12.8□□□□□ -0.36
COL3A1-201ENST00000304636 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
COL3A1-201ENST00000304636 ZNF99A8MXY4 864 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms