RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 STARP49675 285 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GALNTL5Q7Z4T8 443 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OR8D1Q8WZ84 308 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC9A6Q92581 669 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CEP295NLQ96MC4 621 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DEFB118Q96PH6 123 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SSR3Q9UNL2 185 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CORO2BQ9UQ03 480 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PCDHGA3Q9Y5H0 932 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ACTL7BQ9Y614 415 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SPATA31C2B4DYI2 1134 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DNTTP04053 509 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 UGT2B4P06133 528 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HTR1BP28222 390 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GHDCQ8N2G8 530 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ALG3Q92685 438 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HPS1Q92902 700 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KREMEN1Q96MU8 473 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C9IYK1 514 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CASKO14936 926 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GJA9P57773 515 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SIM2Q14190 667 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TAF8Q7Z7C8 310 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SPATA22Q8NHS9 363 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CIB1Q99828 191 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZFP37Q9Y6Q3 630 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 UBE2QL1A1L167 161 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RBMXL2O75526 392 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NCK1P16333 377 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MBTD1Q05BQ5 628 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GRB14Q14449 540 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SPDYCQ5MJ68 293 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CCNYL2Q5T2Q4 361 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LRRC49Q8IUZ0 686 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TRIM63Q969Q1 353 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GGA2Q9UJY4 613 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FCF1Q9Y324 198 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PTPRJQ12913 1337 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TGFB1I1O43294 461 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MATN4O95460 622 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IDO1P14902 403 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SP3Q02447 781 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TMEM63BQ5T3F8 832 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CPTPQ5TA50 214 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TTC23Q5W5X9 447 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DENND5AQ6IQ26 1287 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TTC27Q6P3X3 843 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TXNDC11Q6PKC3 985 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CXXC5Q7LFL8 322 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ADAMTSL2Q86TH1 951 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ANKRD46Q86W74 232 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RBFAQ8N0V3 343 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF433Q8N7K0 673 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 BSNDQ8WZ55 320 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FRMD6Q96NE9 622 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GAL3ST1Q99999 423 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF304Q9HCX3 659 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CYP3A7-CYP3A51PA0A087WV96 503 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CPSF4LA6NMK7 179 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CYP3A7P24462 503 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CEBPGP53567 150 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IL18Q14116 193 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF730Q6ZMV8 503 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 UBE2J2Q8N2K1 259 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 COPS8Q99627 209 aa13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SUCOQ9UBS9 1254 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-201ENST00000299847 E9PAM4 449 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AREL1O15033 823 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CST3P01034 146 aaPredicted RBP13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ADH1AP07327 375 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 POU2F1P14859 743 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 STAT5AP42229 794 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MC1RQ01726 317 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC20A2Q08357 652 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLCO6A1Q86UG4 719 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FAM47BQ8NA70 645 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ADCY4Q8NFM4 1077 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF607Q96SK3 696 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TCF25Q9BQ70 676 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NEK6Q9HC98 313 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DDX3YO15523 660 aaKnown RBP13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NT5EP21589 574 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CTSKP43235 329 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF155Q12901 538 aaPredicted RBP13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GPR65Q8IYL9 337 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DEPDC4Q8N2C3 294 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 WDR60Q8WVS4 1066 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 XAGE5Q8WWM1 108 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SHC3Q92529 594 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DNASE1L2Q92874 299 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms