RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 HLA-EP13747 358 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 SPAM1P38567 509 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 SUOXP51687 545 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 FAM83EQ2M2I3 478 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.74■■□□□ 1.23
PTX3-201ENST00000295927 BIRC8Q96P09 236 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 TRMT61BQ9BVS5 477 aaKnown RBP22.74■■□□□ 1.23
PTX3-201ENST00000295927 ZNF395Q9H8N7 513 aaPredicted RBP22.74■■□□□ 1.23
PTX3-201ENST00000295927 ARL2BPQ9Y2Y0 163 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 GLYATL1P3A0A0U1RQE8 302 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 TARM1B6A8C7 271 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 LTA4HP09960 611 aaKnown RBP22.74■■□□□ 1.23
PTX3-201ENST00000295927 MYL2P10916 166 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 RALBP11234 206 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 TIMP2P16035 220 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 OCRLQ01968 901 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 IFT88Q13099 833 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 ADGRE1Q14246 886 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 ZNF234Q14588 700 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 HNRNPA1L2Q32P51 320 aaKnown RBP22.74■■□□□ 1.23
PTX3-201ENST00000295927 ZNF805Q5CZA5 627 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 AGAP9Q5VTM2 703 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 SNX20Q7Z614 316 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 GPR26Q8NDV2 337 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 C7orf26Q96N11 449 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 ASB8Q9H765 288 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 POPDC3Q9HBV1 291 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 XPR1Q9UBH6 696 aa22.74■■□□□ 1.23
PTX3-201ENST00000295927 RHOBTB1O94844 696 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 SERPINE1P05121 402 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 CA5AP35218 305 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 SLC26A3P40879 764 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 PTGER3P43115 390 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 KPNA2P52292 529 aaKnown RBP22.73■■□□□ 1.23
PTX3-201ENST00000295927 ITGA9Q13797 1035 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 ZYG11AQ6WRX3 759 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 CERS6Q6ZMG9 384 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 PBXIP1Q96AQ6 731 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 FAM136AQ96C01 138 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 C20orf27Q9GZN8 174 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 NPHS2Q9NP85 383 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 MED16Q9Y2X0 877 aa22.73■■□□□ 1.23
PTX3-201ENST00000295927 EDDM13A0A1B0GTR0 161 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 UPK3BL1B0FP48 263 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 UPK3BL2E5RIL1 263 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 C1SP09871 688 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 TROVE2P10155 538 aaKnown RBP eCLIP22.72■■□□□ 1.23
PTX3-201ENST00000295927 PKMP14618 531 aaKnown RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 ITGALP20701 1170 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 EIF2DP41214 584 aaKnown RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 PTPN5P54829 565 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 NFATC2Q13469 925 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 COL19A1Q14993 1142 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 CHRNA6Q15825 494 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 ITPRIPL2Q3MIP1 535 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 POM121L1PQ3SYA9 428 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 SERPINA9Q86WD7 417 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 STK40Q8N2I9 435 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 SMRP1Q8NCR6 262 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 HCAR2Q8TDS4 363 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 MRPL57Q9BQC6 102 aaKnown RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 MRPL46Q9H2W6 279 aaKnown RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 TAS2R13Q9NYV9 303 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 KLHL14Q9P2G3 628 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 DKK3Q9UBP4 350 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 C16orf96A6NNT2 1141 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 ARNTLO00327 626 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 KAT7O95251 611 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 CYP2A6P11509 494 aaPredicted RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 VIPR1P32241 457 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 PDAP1Q13442 181 aaKnown RBP22.72■■□□□ 1.23
PTX3-201ENST00000295927 CTSL3PQ5NE16 218 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 C9orf64Q5T6V5 341 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 RFLNAQ6ZTI6 216 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 OR6Y1Q8NGX8 325 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 UCMAQ8WVF2 138 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 TMEM245Q9H330 911 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 PCDH12Q9NPG4 1184 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 THAP1Q9NVV9 213 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 OXSMQ9NWU1 459 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 FAM50BQ9Y247 325 aa22.72■■□□□ 1.23
PTX3-201ENST00000295927 TRBV5-4A0A0C4DH59 114 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 GOLGA8CPA6NN73 597 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 TGDSO95455 350 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 UGT1A6P19224 532 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 UGT1A1P22309 533 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 UGT1A4P22310 534 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 GRK2P25098 689 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 UGT1A3P35503 534 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 UGT1A5P35504 534 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 ADARP55265 1226 aaKnown RBP22.71■■□□□ 1.23
PTX3-201ENST00000295927 ARHGEF7Q14155 803 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 SETMARQ53H47 684 aaPredicted RBP22.71■■□□□ 1.23
PTX3-201ENST00000295927 TECRLQ5HYJ1 363 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 KLC3Q6P597 504 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 MTSS1LQ765P7 747 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 TTC7BQ86TV6 843 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 ZNF398Q8TD17 642 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 P2RY12Q9H244 342 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms